Pairwise Alignments

Query, 656 a.a., DNA topoisomerase III from Pseudomonas syringae pv. syringae B728a

Subject, 653 a.a., DNA topoisomerase III from Escherichia coli ECRC101

 Score =  426 bits (1095), Expect = e-123
 Identities = 248/602 (41%), Positives = 349/602 (57%), Gaps = 23/602 (3%)

Query: 1   MRLFLCEKPSQAKDIAAALGAT-RRGDG-CWVGANATVTWCIGHLLETAPPDAYDARYKR 58
           MRLF+ EKPS A+ IA  L    R+GDG    G    VTWCIGHLLE A PDAYD+RY R
Sbjct: 1   MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYAR 60

Query: 59  WVLEDLPIVPEKWKMLVKPRTASQFKAVKRLLGEATELVIATDADREGEMIARELIEHCR 118
           W L DLPIVPEKW++  +P    Q   +KR L EA+E+V A D DREG+++  E++++ +
Sbjct: 61  WNLADLPIVPEKWQLQPRPSVTKQLNVIKRYLHEASEIVHAGDPDREGQLLVDEVLDYLQ 120

Query: 119 Y----RGPIQRLWLSALDDASIRKALAALKPGADTFSLYHSALGRSRADWLIGMNMSRLF 174
                R  +QR  ++ L+  ++ +A+  L+  ++   L  SAL R+RADWL G+NM+R +
Sbjct: 121 LAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAY 180

Query: 175 TLLGRQSGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVRLLHD-NQAFIAQW 233
           T+LGR +GYQGVL VGRVQTP L LVV RD  I NFV   ++ +   ++   ++ F A W
Sbjct: 181 TILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIW 240

Query: 234 RAPSDAC----DDQDRCLNQALAQQAAQAMRAAASARLVKLRTERIREAAPLPFDLGTLQ 289
           + PS+AC    D++ R L++ LA+     + +   A +     +R  E+APLPF L  LQ
Sbjct: 241 Q-PSEACEPYQDEEGRLLHRPLAEHVVNRI-SGQPAIVTSYNDKRESESAPLPFSLSALQ 298

Query: 290 EICSKKLGLGAQETLDIAQSLYETHKVITYPRSDCGYLPNSQHGEAAGIIAALCKADPAL 349
              +K+ GL AQ  LDI Q LYETHK+ITYPRSDC YLP         ++ A+    P L
Sbjct: 299 IEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDL 358

Query: 350 ANLSPHLDPQRRSRAWNDSKVTAHHGIIPTAAVRGVERLSGKPRAVYTLIRARYLAQFLP 409
               P +DP  R+R W+D KV AHH IIPTA    +  L+     VY LI  +YL QF P
Sbjct: 359 LP-QPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAI-NLTENEAKVYNLISRQYLMQFCP 416

Query: 410 NHEYDRTQADFDCAGHALRAVGKQIVEPGWKRAMPEALAPAKGREAPAPQPLPALFQGCE 469
           +  + +   + D A     A  + + E GW+      L   +  E     PLP + +G E
Sbjct: 417 DAVFRKCVIELDIAKGKFVAKARFLAEAGWR----TLLGSKERDEENDGTPLPVVAKGDE 472

Query: 470 --CAVAEVILKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAG 527
             C   EV+ +   TQPP+ FT+  L+ AM  +A+ V+D  LK+ L+ T G+GTEATRAG
Sbjct: 473 LLCEKGEVVERQ--TQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAG 530

Query: 528 IIQGLLDRGYLTKQGKSLCAAPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEE 587
           II+ L  RG+L K+G+ + +  A  +L  ++P     P  TA WE  L  +   +   ++
Sbjct: 531 IIELLFKRGFLIKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQD 590

Query: 588 FV 589
           F+
Sbjct: 591 FM 592