Pairwise Alignments

Query, 414 a.a., Exodeoxyribonuclease I subunit D from Pseudomonas syringae pv. syringae B728a

Subject, 381 a.a., exonuclease SbcD, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  139 bits (350), Expect = 1e-37
 Identities = 125/377 (33%), Positives = 173/377 (45%), Gaps = 35/377 (9%)

Query: 1   MRLFHTSDWHLGQNLHGQERDFEHACFLTWLLARLADRKPDVLLIAGDIFDTVNPPVKAQ 60
           MR  HTSDWHLG+ LH Q    E A  L  LL  +   + D L+IAGDIFD   PP  A 
Sbjct: 1   MRFIHTSDWHLGRTLHNQSLLDEQAQMLETLLTLIETHEVDALVIAGDIFDRSVPPAAAV 60

Query: 61  ERLYDFIVNAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVMWLDDGVLDA 120
             L DF+ +   QQ  ++++ I GNHD   R+   A  M     +  G V          
Sbjct: 61  SLLDDFL-DKVVQQLKVSVIAIGGNHDGQERLAFGARQMAGAGLYIQGPV---------- 109

Query: 121 ERLLLPLPDANGDIKAWCLALPFLRPAEVTGPTLGDDYLRGIGRVHELLIAAADLKRQPG 180
              + P+        A+   +P+  PA V    L D+ +         L+A        G
Sbjct: 110 RASIEPVHIDGKQGAAFFYPIPYAEPALVR-HLLNDEDIHSHQDAMAALLAKVTAHNSDG 168

Query: 181 QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSITYVALGHLHKPQRVNGEER 240
              I ISH  + GG+ S DSER L IG A+ +  +LF P   Y ALGHLH PQ   G E 
Sbjct: 169 LPKIVISHCFLDGGNES-DSERPLSIGGADKISPALFAP-FDYAALGHLHGPQ-YKGAEH 225

Query: 241 IRYSGSPIPLSFSEISYQHQILEINCDGETLTSVEPLLIPRAVNLQRLGPAPLADLLVQL 300
           +RYSGSP+  SFSE   QHQ   +     TL ++ P    +A +++ L   P  D+ + +
Sbjct: 226 VRYSGSPLKYSFSE---QHQNKSV-----TLVNILP---GQAPDIRLLPIKPQRDVRI-I 273

Query: 301 KALPDIDL---LADPDRQPWLEVRV----RLDEPQPDLRNQIENALQGKAVRLVRIGAEY 353
           +   D  L    +DP R  +L VR+     + EP   LR    N L  +   L++  A  
Sbjct: 274 EGYLDALLTRGASDPGRDDYLMVRLLDTHAILEPMAKLRAIYPNVLHLERTGLMQERA-L 332

Query: 354 AGKGSADGSEGDATLIE 370
            G G     + + T+ E
Sbjct: 333 EGPGRERMQKSELTMFE 349