Pairwise Alignments

Query, 314 a.a., type III transcriptional regulator HrpR from Pseudomonas syringae pv. syringae B728a

Subject, 440 a.a., Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake from Pseudomonas sp. S08-1

 Score =  241 bits (614), Expect = 3e-68
 Identities = 129/289 (44%), Positives = 182/289 (62%), Gaps = 1/289 (0%)

Query: 17  ALSAGHQIVMNSVLMDMDLLLCGETGTGKDTLASRIHELSSRTGP-FVGMNCAAIPESLA 75
           A+    +++ N      ++L+ GETGTGK+ +A  +H+ S R G  FV +NC  +PESL 
Sbjct: 152 AMQQLRELIANVADTGANVLIEGETGTGKELVARCLHDFSRRQGKEFVALNCGGLPESLF 211

Query: 76  ESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGVERLG 135
           ES++FG    AFTG  + R G IE + GG+L+LDEI+SMPL+LQ KLLRVL+   +ERLG
Sbjct: 212 ESEIFGHEANAFTGAGKRRIGKIEHADGGSLFLDEIESMPLALQIKLLRVLQEHSLERLG 271

Query: 136 STDFIPLDLRVIASAQRPLDELVEQGLFRRDLFFRLNVLTLQLPALRKRREQILPLFDQF 195
           S   I +D RVIA+ +  L EL ++G FR DL++RLNV+TL+LP LR RRE IL LF+ F
Sbjct: 272 SNQPIAVDCRVIAATKADLAELGQRGEFRSDLYYRLNVVTLELPPLRDRREDILLLFEHF 331

Query: 196 TQDVAAESGRSVPTLDNRRVQILLSHDWPGNVRELKSAAKRFVLGLPLLGAEPVEARDPV 255
            Q  A    R++P LD R    L +HDWPGNVREL++ A+RF LGLP+            
Sbjct: 332 LQLAALRFDRALPELDRRTAATLQAHDWPGNVRELRNVAERFALGLPVFKKSDAAPDGSG 391

Query: 256 TGLRMQMRVIEKMLIQDALKRHRHNFDAVLEELELPRRTLYHRMKELGV 304
            G    +   E+ L+  AL+RH  N     ++L + + TL+ ++K+ G+
Sbjct: 392 PGFAEAVEAFERNLLGAALERHAGNLSQAAQDLGMAKTTLFDKVKKYGL 440