Pairwise Alignments

Query, 551 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 637 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  290 bits (741), Expect = 2e-82
 Identities = 191/467 (40%), Positives = 292/467 (62%), Gaps = 28/467 (5%)

Query: 81  EKAQMELEAADSRKQF-ETRLAIYDKLISSDDDRQLFNSVSASWAAYLKVSNDLFDQSRQ 139
           E+A M    A +  Q+ E RL +   ++ S     L   V+A+W + L +S  L    R 
Sbjct: 166 ERAAMTRTEAQAASQYAEARLLLIGLILVS----VLIAVVAATWIS-LSISRGLRGTIRL 220

Query: 140 NLEAQARALLKGE-SKTHFDEVTTQLQKMVE-LNEAGATIAGNKGTSLYETSRISIIVVL 197
                A A+  G+  +T   +   +++ MV+ LN   AT+       + +T     + V 
Sbjct: 221 -----AEAVSIGDLDQTVSVKTNDEIKDMVDALNTMTATLRAT--AKIADTVADGDLSVE 273

Query: 198 IAALLIGLGLALFIARIISRPLKEAATAAEQLAEGNLNAHIGHGSRDET-GMVLNAMRNM 256
              L     L + + R+IS  L+  A  A+ +A+G L       S ++T G+   A++ M
Sbjct: 274 SKPLSDKDALGIALRRMISS-LRATAEVADAIADGTLTVEAKPQSENDTLGL---ALKRM 329

Query: 257 VGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVEETSASVEQMSASINQN 316
           V KL  ++GE  +AA+N++S S+E+SATA+ +SQ  +EQA+S EE SAS+EQM+A+I QN
Sbjct: 330 VEKLREVVGEATSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEQMAANIKQN 389

Query: 317 TENAKVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDDIAYQTNLLALNAAIEA 376
            +NA  T+ +A +++ +A   GE+V + VVAM+ IA++I+I+ +IA QT+LLALNAA+EA
Sbjct: 390 ADNASQTEKIARQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQTDLLALNAAVEA 449

Query: 377 ARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGELSSSSVDMAEKAGKLLDEMVPSINKTS 436
           ARAGEHG+GFAVVA+EVRKLAERSQ+AA EI  +SS +V  A++AG++L  +VP I KT+
Sbjct: 450 ARAGEHGRGFAVVASEVRKLAERSQMAASEISTMSSQTVRAAQEAGEMLGRLVPDIRKTA 509

Query: 437 DLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAATAEEMSSQAEQLQQAMS 496
           +LV EISAA  EQ  G  QIN A+ QL++VTQQNAS+SE+++AT+EE+++Q+EQLQ +++
Sbjct: 510 ELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEQMSATSEELAAQSEQLQASIA 569

Query: 497 FFTLDASPRAVAQSATVDSRNSPNRQPPRPPQQAPRKAFAQSMAGAP 543
           +F +D    A         R++P+ +PP   + A     A +  G P
Sbjct: 570 YFRVDEGSGA--------RRSTPSAKPPTIGRVARSLGKAGAARGGP 608