Pairwise Alignments

Query, 445 a.a., Two-component response regulator PilR from Pseudomonas syringae pv. syringae B728a

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  306 bits (784), Expect = 9e-88
 Identities = 179/458 (39%), Positives = 269/458 (58%), Gaps = 26/458 (5%)

Query: 7   ILIVDDEPDIRELLEITLGRMKLDTRSARNVAEAHDWLAREPFDMCLTDMRLPDGNGLEL 66
           +L++DDEP  R ++   +  +      A +  E  + L  E   + L DMR+P  +G E 
Sbjct: 4   LLVIDDEPGHRLMVRAVMEDVGWHVVEAGSGEEGLELLVHEQVHVVLLDMRMPGMDGQET 63

Query: 67  VQHIQHGYPHVPVAMITAHGNLDTAIHALKAGAFDFVTKPVDLGRLRELVNSA-----LS 121
           +  I    P +PV M+TA+G + +A+ A+K GAFD++TKP D   L  ++  A     L 
Sbjct: 64  LARILEIQPGLPVVMLTAYGTVGSAVEAMKCGAFDYLTKPADNEELVAVLEKAWEHRRLV 123

Query: 122 LPGAQ-PTRSIDNR----LLGDSLAMRTLRSQIGKLARSQAPIYISGESGSGKELVARLI 176
           +   +   R ++N     L+G S  M  +R  I +   S+A + I GESG+GKEL+A+ +
Sbjct: 124 VENEELRKRYVENDPTAPLVGASQVMHRMRDFIRQAGPSEATVLIMGESGTGKELIAQAL 183

Query: 177 HEQGPRIDKPFIPVNCGAIPSELMESEFFGHRKGSFSGAHEDKPGLFQAAHTGTLFLDEV 236
           H+   R  +P + VNC A+P  L+ESE FG+ +G+F+GA +DKPG FQ A  GTLFLDE+
Sbjct: 184 HDASTRARQPLVKVNCAALPGHLLESELFGYVRGAFTGAVKDKPGRFQLARGGTLFLDEI 243

Query: 237 ADLPLAMQVKLLRAIQEKSIRSVGGQQEQIVDVRILCATHKNLNAEVAAGRFRQDLYYRL 296
            +LPL +Q KLLR +QE+ +  +GG +   VDVRI+ AT+++L  EVA G FR+DLY+RL
Sbjct: 244 GELPLELQAKLLRVLQERVVEPLGGVRPVSVDVRIIAATNRDLRREVAKGTFREDLYFRL 303

Query: 297 NVIEVRVPSLRERREDIDQLAASVLKRLAGNGAQPVARLNAQALETLKSYRFPGNVRELE 356
           NV+EV  P LR+R ED+ QL   +L +L     + +  ++A   E L  + +PGNVRELE
Sbjct: 304 NVLEVVSPPLRKRMEDLPQLVEELLGKLCRKNRKSIRCISADFFEALSRHSWPGNVRELE 363

Query: 357 NMLERAYTLCENDEIHASDLRLTESASPQ-ENDGPSLADI---------DNLEDYLESVE 406
           N+LERA  L   D + A      ++  PQ   D P +AD+         D+    L+  E
Sbjct: 364 NVLERALILSRTDSLSA------DALPPQLFGDEPQVADMQQERPVVDDDSRPCSLDEAE 417

Query: 407 RQLILQALEETRWNRTAAAERLSLSFRSLRYRLKKLGL 444
           +  +L+AL+    +R   A+ L +S R+L+Y+LKK GL
Sbjct: 418 KGELLRALDVHGGHREKTADALGISRRTLQYKLKKFGL 455