Pairwise Alignments

Query, 658 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 666 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  303 bits (775), Expect = 2e-86
 Identities = 213/673 (31%), Positives = 346/673 (51%), Gaps = 37/673 (5%)

Query: 8   IASQLGIALAVILAVVISGSTLFALRSLDASNLVIRE--EHMSSEARLLADQLNTFHSTL 65
           +A Q+GI   ++  VV +   L A +S  ASN + ++    MSS+A  + D L   + +L
Sbjct: 8   LAKQIGILATLLTLVVFALMGLIAYKS--ASNALQQKGTHAMSSKAEAVTDMLALQYRSL 65

Query: 66  RDSTQRLSGLFEKRFAAGLSLQADKPVTVAGTSTPGLFLRDAALNNDFTEVDEFRSMTAG 125
                R + +  + +  G   ++   V V G  TP L      +N+  ++VD + ++T G
Sbjct: 66  ATLAHRNADVLREMYP-GSFYKSGNTVKVLGQDTPALMHDKEQINSTKSKVDRYANLTGG 124

Query: 126 VATIFVRSGDDFIRISTSLSKQDGTRAIGTVLDRKGAAYERLIAGQSYVGKAVLFDRYYM 185
            AT+FV+ GDDF+RISTSL K DG+RA+GT L +   AY  L+ G  Y G A LF   YM
Sbjct: 125 TATVFVKDGDDFLRISTSLKKADGSRALGTYLGKTHPAYNVLMQGGQYEGYAKLFGHDYM 184

Query: 186 TQYSPVRDSSGKIIAALFVGFDYTDAQKTQFDNLKSFRIGSTGSLALLDDKGTWLV---- 241
           T Y  V++ SG+++A L++GFD  D+       +   ++  TG   LL+ K   +     
Sbjct: 185 TVYRAVKNPSGEVVAVLYIGFDIGDSLTQLKAAVSRLKVEKTGHFMLLNQKDEVVYAQES 244

Query: 242 ---PPAGVKSLEGAAKSVAELASKPGKAQFWDDGDDNYYSVGQPFAGGPWTVIASMPRKE 298
               P     LEG + S  +L    G+ QF D+ +   Y + +   G  W +IAS+P  E
Sbjct: 245 QAGEPLNASMLEGLSPS--DLPVGSGEMQFTDNQELERYLITRDIPGWHWRLIASVPMAE 302

Query: 299 ISE---VTWHVGTQLAIGSLLAMLIAVISAIWLLRSKLRPLSELVRQADALGAGDLSVRL 355
           + E       V T L+IG   A+L   +S  W+L   L+PL++L  Q + LG G+L    
Sbjct: 303 LHEESVALLKVNTLLSIG---AILFITLSLSWVLLRALKPLTDLKTQLEGLGRGELDQHW 359

Query: 356 NVTSND----------EIGQLSGSFNKMSEALSSMVSHIRTAAQEVSTRANVLSGLSGGA 405
             +  D           +  ++G+   + E+L S V+ + T A++    A  ++  +G  
Sbjct: 360 QTSPADTHNEVDHIRNSVATMAGNLKTLIESLKSSVTTLGTMAED----ARQIAAQNGDE 415

Query: 406 FEGMEQQSGEITSMAGAVEEFSATSMNIADNMGNTERLAQENAQQTRIGRTSMEEASSSL 465
              +  Q+ +I   A A+EE S +  ++A++  +  + +Q      + G+  ++   + L
Sbjct: 416 ATALMAQTDQI---ATAIEEMSTSIRDVAEHSSDGAQQSQSVDSAAKEGQKRLDGMVADL 472

Query: 466 QQIATSLSSTAKVIDTLGQRSQEIGSIVGVITSIADQTNLLALNAAIEAARAGEQGRGFA 525
            +++  L+++   ++ + + S+ I  +  VI SIA+QTNLLALNAAIEAARAGEQGRGFA
Sbjct: 473 GRLSEVLAASHDAVEQVSKESEAISQVTEVINSIAEQTNLLALNAAIEAARAGEQGRGFA 532

Query: 526 VVADEVRSLASRTREATDEISGMIASIQQETGNAISTMQQGNTLMQEGLSLNAKVASALA 585
           VVADEVR+LASRT+ +  EIS  I ++Q +  +  + M++ + L Q      +     L 
Sbjct: 533 VVADEVRTLASRTQSSIQEISKTIGNLQDKVRSTAAQMKKAHELGQSCAEQGSITGEELD 592

Query: 586 QIDEQSRSAGHQFAAITTATQEQSSTATMLSSNLQSIAMANSEQRQVMSNLAITAQELNG 645
            I  +        A+I +ATQ+QS+ A  ++ NL  I+    E          +A +L  
Sbjct: 593 TITGRIGDLATVSASIASATQQQSTVAEDITRNLHLISDLAREGEFRAGATVDSANQLRD 652

Query: 646 LATELRHEVDRFR 658
           LA +L   +  FR
Sbjct: 653 LARDLTARIGVFR 665