Pairwise Alignments

Query, 451 a.a., TPR repeat from Synechococcus elongatus PCC 7942

Subject, 527 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  149 bits (376), Expect = 2e-40
 Identities = 134/464 (28%), Positives = 205/464 (44%), Gaps = 78/464 (16%)

Query: 14  QDWSTALQLIELAAWQEPDNPQILCRWGDWLAAAGQPEEAIAAYQAVLEFQPGCPQSIAA 73
           +D++ ALQ  E     EP +  +       L   G+ ++A  AY  +LE +P  PQ++  
Sbjct: 94  RDYARALQTAECGLALEPASLPLNFFMAVILQVQGRSDDAAVAYHRLLELRPDHPQALVN 153

Query: 74  WAAVLNEQGQFAEAIALLDQASEQTADLWHQRAVALQSLGDWPQALTSCDSALQLDPTAA 133
              V+ + G  +EA   L QA                               + L P+  
Sbjct: 154 LGVVVKDLGSLSEAERHLRQA-------------------------------IALAPSYL 182

Query: 134 ESQFLRSKLRLGLGDWSQGWPEYESRLLVFSELRDR----LPSFGCPLWQGEDLT----- 184
            ++   S++ L  G + + WP +E R   F +   R     P+   P W+GE L      
Sbjct: 183 GARASLSQVLLAAGRYEEAWPYFEDRWANFVDADGRPASVRPTLPLPQWKGERLDIASAS 242

Query: 185 ------NKTLLIWGEQGYGDQIQFVRYLSVLHDRWPETPLLLLVSEPLVDLFRQLAIANL 238
                    LL+  EQG+GD +QFVRYL +  +R+        +  P +    + + A+L
Sbjct: 243 QGMPEYGARLLVIPEQGHGDSLQFVRYLPMALERFARVGY---ICPPSLRRLYEESFAHL 299

Query: 239 QVATQFT--FETESAYDFHLPLLSLPERLGATADVIPLAQGYL----PRSLQSEIRLQAN 292
                        S +D+H PL+SLP   G   D IP A  YL     RS     RL   
Sbjct: 300 PGLMMLDDGLSDLSDWDWHCPLMSLPMAFGTRLDNIPAAT-YLHADAARSASWRARLAML 358

Query: 293 PRQ--LQVGFVWQAGET--SDRRYQWRQASKSVPLEQFLQLRLQVNHCQFWSLQV--GPA 346
           P     +VG VW  G +  ++ R +    ++  PL       L + + ++ SLQ    PA
Sbjct: 359 PDAGLPRVGLVWAGGHSGLTEDRARSLNPAQVAPL-------LALPNVRWISLQKTDDPA 411

Query: 347 RQSLLQNW----DWADCDLADRMHSFADTAAVLNQMDLLITVDTAIAHLAGALEIPTWLL 402
           +++         DW D D  D    FADTAA+++ +DL+I+VDT++AHLA A+  P WLL
Sbjct: 412 KRADAVTHAPLTDWMD-DATD----FADTAALIDNLDLVISVDTSVAHLAAAMGKPVWLL 466

Query: 403 LPKFADWRWSLTGSETPWYQSMRLYRQAIAGDWRSVFEQLQQDL 446
                 WRW     ++PWY S+RL+ Q   GDW  V E++ + L
Sbjct: 467 NRFAGCWRWLRDRDDSPWYPSVRLFTQLQRGDWDGVLERVAEAL 510



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 96  EQTADLWHQRAVALQSLGDWPQALTSCDSALQLDPTAAESQFLRSKLRLGLG--DWSQGW 153
           E+T + W  +A   +  G++  A T  D  +  DP  A++ +    + L     + +Q W
Sbjct: 10  EKTLNAWFNQAEEARLAGEFDTARTLLDRIIGQDPAHADALYTYGLVALASNQLESAQSW 69

Query: 154 PE 155
            E
Sbjct: 70  VE 71