Pairwise Alignments

Query, 1031 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1025 a.a., Cation/multidrug efflux pump from Enterobacter asburiae PDN3

 Score =  746 bits (1925), Expect = 0.0
 Identities = 409/1010 (40%), Positives = 612/1010 (60%), Gaps = 11/1010 (1%)

Query: 9    NLSRWALTHQQMVGFLLVLAAVAGLFSYMALGRKEDPEFTVKTMMITVGWPGATAQQMSQ 68
            NLS WAL +QQMV F ++L    G+F Y  L R EDP FT+KT +++  WPGA+    ++
Sbjct: 10   NLSAWALKNQQMVSFFMLLVIAMGVFCYEKLPRNEDPAFTIKTAVVSAQWPGASVADTTR 69

Query: 69   QVIKPIETVLTENIAEIDYVKSKARPGQATLNVTLISTVKSSAVPDIWYRIRKTVTDNRA 128
             +   +E  L E    +DY++S+ R G+  ++V L       +VPDIWY++RK + D   
Sbjct: 70   LLTDTLEKKLQET-PWLDYLESETRAGRTVIHVNLRDDTPPQSVPDIWYQVRKKMQDIAP 128

Query: 129  DLPNGVVGPAFNDEFGTTYGNIYAVTGDGFSYPVLKRYAETLRDRIQALPDVAKTQIIGA 188
             LP+GV GPA +DEF  T+G IYA   +GF+   ++   ET+R  + +LPD+ KT ++G 
Sbjct: 129  SLPDGVQGPAVDDEFDDTFGTIYAFIPEGFTLREVRDRVETIRRELMSLPDMGKTTLLGE 188

Query: 189  QDEAIYVTYDSARLAMSGISAQAIADALDTTNAVAASGIVEAGAERVRMQVTGDFASVEA 248
            Q E   + +  ARLA  G+  QA+ADAL   NAV  +G +    E + ++V+G   + E+
Sbjct: 189  QQEQWVLAFSPARLAGMGLDIQAVADALRAQNAVVPAGTMRTEKENMAIKVSGALTTEES 248

Query: 249  IAATPIVANGKSVRLDAIAKVERKPVHPATFRMRFGAKDAVGVGISLRSDGDVARLGEDL 308
            + A  +  N + + L  IA + R+   P     R   + A+G+ +S+   G++ R G  L
Sbjct: 249  LRAVTLHVNNRYIPLTDIATITREIAEPPAPAYRVNGRPAIGLAVSMAPTGNMLRFGAAL 308

Query: 309  KHTIAALQSEMPVGVDIHTVSDQTRVVDESVGEFTTSLIEAIVIVLAVNFLSLGWRPGIV 368
               +AAL + +P G+++  V+DQ+ VV ++   F   LIEA++IVLAV+F+SLG R G+V
Sbjct: 309  NARMAALSAGLPHGIEMVKVADQSAVVSDAASGFIRVLIEAVIIVLAVSFVSLGLRAGLV 368

Query: 369  VALCIPLVLAMTFVCMLYVGIDLQRISLGALIIALGLLVDDAIIVVEAVATHLEAGWTRT 428
            VA  IPLVLAMTF  M+  GI LQRISLGALIIALGLLVDDA+I VE + + LEAG +R 
Sbjct: 369  VATAIPLVLAMTFAGMMLAGIGLQRISLGALIIALGLLVDDAMIAVETMVSRLEAGDSRR 428

Query: 429  RAAVSAYSVTAVPMLVGTLITVAGFLPIAMSKATASEYVISLFQVIAISLILSWVVAVIF 488
             AA  A+  TA PML GTL+ +AGF+P+  + ++A EY  SLF V+ I+L+ SW VA++F
Sbjct: 429  LAATHAFKTTAFPMLTGTLVMIAGFIPVGFAASSAGEYCFSLFAVVLIALLCSWAVAILF 488

Query: 489  TPFIAYHLLPQRADARDDAGEPEEQYEGRFYGWFRRMLDRCLDRRKTVVAVALAMFVGSM 548
            +P     LLP++         P     GR    + R+L   L  R   V +AL+  +G  
Sbjct: 489  SPLTGTWLLPEKV-------RPHAAGPGRIARGYGRLLRLALRHRLATVLIALSA-LGLS 540

Query: 549  LLFQIGVPRQFFPASDRPELVVDLQLSQNASFAQTQAVAARMEQLLARDDRVVSTTAYLG 608
                  +  +FFPASDRPEL+V L L  NAS  +T     ++E+ LA +  +   + Y+G
Sbjct: 541  AYGTTFMQGEFFPASDRPELLVSLTLPANASQPETLREVEKLEKALASNGNIDRYSTYVG 600

Query: 609  GGSPRFYLPLNVQTPDITLAELVLQTRDEEAREGVIASIQSLFATHFPEARGRVSRLENG 668
             G+ RFYLP++V   +  +A++V+  +D EAR+ + A +  + AT F +   RVS LE G
Sbjct: 601  SGAIRFYLPMDVLLENENIAQMVVVAKDLEARDRLHAQLNRILATQFSDIITRVSPLELG 660

Query: 669  PSVGQPVQYRVAGPDLTQIMPVAKRLEELIRADSHARDVNSDLGEPLKAIRVDLDQDKVR 728
            P VG P++YRV+GPD  Q+   A RL + I    ++RDVN   GEP + I ++++Q   R
Sbjct: 661  PPVGWPIKYRVSGPDYLQVRAFANRLTDAIGQSPYSRDVNQTAGEPERVITLEVNQTAAR 720

Query: 729  ALGLSTQAVQQSLQAAIGGAGTTSFRDRDLALEVVLRLSAAERTDLGRIANLPISTPNG- 787
            A G+S++++ ++L     G+  TS RD D  ++VVLR +   R     +++L I   +G 
Sbjct: 721  AAGISSESLARTLNTVWSGSVVTSIRDNDRLVDVVLRATDDARHSTATLSSLTIQGNDGK 780

Query: 788  AVPLAQLGHVSAGSEPAVIYQRNRQPTITISADVEGE-QASDLTKRIEPQIEALRRDLPS 846
             +PL+ +     G +  VI++R R P IT+  D+  E +A  ++  + P ++ LR  LP+
Sbjct: 781  KIPLSAVATPVWGVDDPVIWRRQRVPFITVQTDLAPEMKAEAVSAALRPAVDRLRASLPA 840

Query: 847  GASIVKGGSEEQSSINQKATMAAVPFAIFVIVILLMLQLQNVKRMLVVLATGPLALIGVA 906
            G SI +GG+  +S     +    +P  + ++++LLMLQL+   RML+ L   P  L G+ 
Sbjct: 841  GYSIEEGGAVAESDKGNSSVFTVLPVTLVLMLLLLMLQLRRYSRMLLALLMAPFGLPGIV 900

Query: 907  LIMALFRIPFGFVAMLGSLALFGMVLRNSVILIAQIDTLSGHGLAMREAVREAAVHRLRP 966
            L M     P GFVA+LG +AL GM++RN+VILI+++D+    G+A   A+  AA HR RP
Sbjct: 901  LAMLPGGTPMGFVALLGVIALAGMIVRNAVILISEVDSNLAQGMANDAAIMAAAEHRARP 960

Query: 967  ILLTALAAILAMIPLTRSTFWGPMAWAIMGGLMVATILTLIVLPALYELV 1016
            I LTA AAIL MIP++   FWGPMA+AI+GGL+VAT++TL VLPA + L+
Sbjct: 961  ICLTACAAILGMIPISHQVFWGPMAYAIIGGLLVATLVTLTVLPASFSLL 1010