Pairwise Alignments

Query, 401 a.a., RND efflux system, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 397 a.a., RND efflux system, membrane fusion protein CmeA from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (280), Expect = 2e-29
 Identities = 92/350 (26%), Positives = 159/350 (45%), Gaps = 16/350 (4%)

Query: 51  ETAADASVPTVAVVKPTMNGEGNDLVLPGNVQAYNSAAIYARTNGYVRRWLADIGDRVRA 110
           E+A     P V+V+      +     L G  QA+  A I  +  G V++ L   G  V+A
Sbjct: 31  ESAPTPEPPKVSVITVQPQSQALTTELAGRTQAFMVAEIRPQVGGIVQQRLFVEGAEVKA 90

Query: 111 GQPLAVLDAPDLDQQVAAAQADYQTALANQRLAETTSKRWSAMLAQDAVSRQEADEKAGD 170
           GQ L  LDA      +A AQA+   A A  + A+ T+KR + ++  DA+S+Q+ ++   +
Sbjct: 91  GQALYQLDASSYKAALAEAQANLAKARATLKSAQATAKRDAQLVKIDAISQQDNEDAQAN 150

Query: 171 LAARTAVSNAALANVKRLKAQQGFTRLAAPFDGVVTSRSAQIGALVVSGNAAAQPLFTVS 230
           L    A    A A+V   +    +TR+++P  G V + +   GALVV+   +A  L TV 
Sbjct: 151 LMTAEAEVQVAQADVDTARINLAYTRISSPVSGRVETSTVTPGALVVANQDSA--LTTVQ 208

Query: 231 DIHRMRIYV--------RVPQGYSASVRPGMG-----ATLTLPEYPGRSFNATLTSSSGA 277
            +  M + V        R+ +  ++ V    G       L L +    +    L  S  +
Sbjct: 209 QLDPMYVDVTQSTTELLRLKRDLASGVLQSNGEGEARIRLKLDDGSTYAHEGRLKFSGVS 268

Query: 278 VDAQSGAVLVQLQAENPDGALKPGAFAQVSFKVGAGQGNGMTLPGSAILYSNNGPSVAVV 337
           V+  +G V ++ Q  NPD  L PG + +   +  A     + +P  A+  S +G +  +V
Sbjct: 269 VNEGTGTVTLRAQIANPDRLLLPGMYVRAVLE-QARDDKAILIPQKAVTRSASGATSVLV 327

Query: 338 GADNRITMKPVAIARDEGATVQIASGLSPNDRIVDTPPDAIRTGDTVKVQ 387
             D ++  + + I R       + +GL+  D+++      +R G+TV  Q
Sbjct: 328 VVDGKVEQRMLTIDRAVDNQWWVTAGLNAGDQVIVEGGQKVRVGETVVAQ 377