Pairwise Alignments

Query, 300 a.a., Site-specific tyrosine recombinase XerC from Sphingobium sp. HT1-2

Subject, 322 a.a., Site-specific tyrosine recombinase from Xanthomonas campestris pv. campestris strain 8004

 Score =  154 bits (390), Expect = 2e-42
 Identities = 107/298 (35%), Positives = 155/298 (52%), Gaps = 16/298 (5%)

Query: 8   SLPERWRQHLSLDRRRSAHTVRAYVATAERLVAFLAEHQGQAVTAASLARLEQADLRAYL 67
           S  E +  HL ++R+ SAHT+ AY      L+ + A  QG    +  +A+L+ A LR ++
Sbjct: 29  SAVEPFLAHLQIERQVSAHTLDAYRRDLAALIGW-ASAQG----SEDVAQLDSAQLRKFV 83

Query: 68  ASRRVDGIGNISAARELSAVRGF----LKFVGGAEARVPQLKGPRVKRGLPRPISPDEAL 123
            +    G+   S  R LSA R +    LK    A +    L+ P+  R LP+ +  DEA+
Sbjct: 84  TAEHRRGLSPKSLQRRLSACRSYYAWLLKHGRIATSPAAALRAPKAPRKLPQVLDADEAV 143

Query: 124 ALAGDVAEGAREDWIGARDWAVLLLLYGAGLRIGEAMGLMGDIMPLGDTL-RVTGKRGKT 182
            L     E   +  +G RD A+L L Y +GLR+ E   L    + L   L  V GK GK 
Sbjct: 144 RLV----EVPTDAPLGLRDRALLELFYSSGLRLSELCALRWRDLDLDSGLVTVLGKGGKQ 199

Query: 183 RLVPLLPQVRSAIEAYADQCPWSPERDQPLFRGARGGPLSAALIRRSVQGARGRLGLSDR 242
           RLVP+     +A+ A+      S +    +F G  GG +S   ++  ++    R G+   
Sbjct: 200 RLVPVGSHAVAALRAWQRDSGGSAQTH--VFPGRAGGAISQRAVQIRIKQLAVRQGMFKH 257

Query: 243 TTPHALRHSFATHLLGRGADLRSLQELLGHASLTSTQVYTQVDAAHLLDVYRAAHPRA 300
             PH LRHSFA+H+L    DLR +QELLGH+ + +TQ+YT +D  HL  VY AAHPRA
Sbjct: 258 VHPHMLRHSFASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQHLAKVYDAAHPRA 315