Pairwise Alignments

Query, 292 a.a., flagellar motor protein MotA from Sinorhizobium meliloti 1021

Subject, 283 a.a., Flagellar motor rotation protein MotA from Pseudomonas fluorescens FW300-N2E2

 Score =  193 bits (491), Expect = 3e-54
 Identities = 102/280 (36%), Positives = 160/280 (57%), Gaps = 10/280 (3%)

Query: 4   IIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMAN----SMKVVKDTGK 59
           IIG++V F  +LGGY+   G +  L QPFE++IIGGA +G F+ AN    +M V+K +  
Sbjct: 4   IIGIIVVFASVLGGYVLSHGKIAALVQPFEVLIIGGAALGAFLQANPGYMTMHVLKKSLG 63

Query: 60  ALGEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQN 119
                F H       YL+ LG++Y ++   R +    IE  I++   S IF   P VL++
Sbjct: 64  MFSSRFSHTF-----YLEVLGLIYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAVLKD 118

Query: 120 KELTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVA 179
             +TAFICDY+R++  GN   HE+E L D E+ ++  D     HA+  + D +P  GIVA
Sbjct: 119 ARMTAFICDYLRIMSSGNMAPHELEGLFDMELYSLKEDLEHPSHAVNGIADGMPGFGIVA 178

Query: 180 AVLGVIKAMGAISEAPE-VLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLY 238
           AVLG++  M ++ +  +  +G  + AALVGT  G+  +Y   GPL  ++    +++  +Y
Sbjct: 179 AVLGIVVTMASLGDGDQKSIGLHVGAALVGTFFGILAAYGFFGPLAHSLAHDAKEELNVY 238

Query: 239 VIVKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQ 278
             +K +L+A  +G  P +A+E+GRK +    RPS   +EQ
Sbjct: 239 EAIKASLVASASGMPPSLAVEFGRKVLYPAHRPSFAELEQ 278