Pairwise Alignments

Query, 341 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

Subject, 296 a.a., D-ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor from Escherichia coli BL21

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 84/302 (27%), Positives = 137/302 (45%), Gaps = 23/302 (7%)

Query: 1   MKKTVLSAAFGALAMGVAFASPSQAAEVSACLITKTDTNPFFVKMKEGAAAKAKELGVTL 60
           MKK  L+    A+A+    ++ + A +  A L+  T  NPFFV +K+GA  +A +LG  L
Sbjct: 3   MKK--LATLVSAVALSATVSANAMAKDTIA-LVVSTLNNPFFVSLKDGAQKEADKLGYNL 59

Query: 61  KSYAGKIDGDSESQVAAIETCIADGAKGILIAASDTQGIVPQVQKARDAGLLVIALDTPL 120
                +   +   ++A ++     G K +LI  +D+  +   V+ A  A + VI LD   
Sbjct: 60  VVLDSQ--NNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQA 117

Query: 121 EPLDAADATFATDNLLAGKLIGQWAAATLGDAAKEAKVAFLDLTPSQPSVDVLRDQGFMI 180
              +   +  A+DN+L GK+ G + A   G+ AK  ++  +  T +       R +GF  
Sbjct: 118 TKGEVV-SHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARE----RGEGFQQ 172

Query: 181 GFGIDPKDPNKIGDEDDPRIVGHDITNGNEEGGRTAMENLLQKDPTINVVHTINEPAAAG 240
                  +           ++     + +   G   M+NLL   P +  V   N+  A G
Sbjct: 173 AVAAHKFN-----------VLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALG 221

Query: 241 AYEALKSVGREKDVLIVSVDGGCPGVKNVAEGVIGATSQQYPLMMAALGIEAIKKFADTG 300
           A  AL++ G+  DV++V  DG   G K V +G + AT  Q P  + A G+E   K    G
Sbjct: 222 ALRALQTAGK-SDVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVL-KG 279

Query: 301 EK 302
           EK
Sbjct: 280 EK 281