Pairwise Alignments

Query, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 354 a.a., Multidrug resistance protein MdtA from Pseudomonas sp. RS175

 Score =  182 bits (462), Expect = 1e-50
 Identities = 114/347 (32%), Positives = 186/347 (53%), Gaps = 1/347 (0%)

Query: 16  LTAILLGAVLSGCSQEKVETKETIRPVKVVEIAAAGEPRELHYSGSVRARTEMNLGFRVG 75
           L  +L G  L+ CS+E+    E +RPV  +E+ A  +     ++G+++AR E N+GFRV 
Sbjct: 4   LWMVLAGLALAACSKEEAPP-EPVRPVLSIEVRALDQQALGRFAGNIQARYESNVGFRVA 62

Query: 76  GKITERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALAKLRAEQLF 135
           G+I  R V++G  VK GD+LA +D TD +  + +A+ +L   E Q         R +QLF
Sbjct: 63  GRIARRNVDVGAEVKKGDLLATLDPTDQQNQLRAAQGDLARIEAQYINAQANARRQQQLF 122

Query: 136 TKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVTAVNADIGQ 195
            +   +QAQLD A        ++ + A +++ QA++Q++Y++L+ D + +VTA +A+ GQ
Sbjct: 123 DRGVGAQAQLDIAQTDLKTTGASLEQARAAVEQARDQLNYSELRTDHDAVVTAWHAEAGQ 182

Query: 196 VVGTGTPVVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVLDGHVREVSGSA 255
           VV  G  VVT+A    KE  I +P        P     V    +        VRE+   A
Sbjct: 183 VVTAGQQVVTLARPDIKEAVIDLPAGLAERLPPDVVFEVSAQLDPATRTTATVREIEPQA 242

Query: 256 DQRSRTFSVRVSLPNDERVLLGMTATVEAAAASSAPLVSIPLSALSKKDGQNIVWIVDRD 315
              +RT   R++L +    L   TA     +++  P + +PLSAL + DG+  +W+VD  
Sbjct: 243 QSATRTRRARLTLADTPPGLRLGTAIGVTLSSAIEPRIELPLSALQEVDGKARIWLVDPQ 302

Query: 316 FSTVHARPIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKVRL 362
             TV  R +++ + + + V V +G+ AGD VV+AG   +    KV+L
Sbjct: 303 SQTVSPRDVRILERSADVVLVANGIKAGDRVVSAGVNSLQPGQKVKL 349