Pairwise Alignments

Query, 706 a.a., transporter protein from Sinorhizobium meliloti 1021

Subject, 657 a.a., choline/carnitine/betaine transporter BetTC from Pseudomonas putida KT2440

 Score =  641 bits (1654), Expect = 0.0
 Identities = 326/649 (50%), Positives = 446/649 (68%), Gaps = 10/649 (1%)

Query: 50  RFKVNLPVFVGSVAVIALFVGIGVIAPKRAESIFSGMQTAILSGFGWLYLLSVAVFLFSM 109
           R  +N PVF  S  ++ L V       + A+++F  +Q  I++   W Y+L VA+ L S+
Sbjct: 8   RSTLNPPVFYTSAILVFLLVLYATAFQEHAQTLFEQVQRWIITNASWFYILVVALVLISV 67

Query: 110 LFLAFSRYGELKLGPDDSEPEFRYLSWIAMLFAAGMGIGLMYFAVGEPMTHFASPPEAEP 169
           +FLA SRYG++KLGPD SEP++R  SW AMLF+AGMGIGLM+F V EP+ HF++PP  +P
Sbjct: 68  VFLAVSRYGDIKLGPDHSEPDYRKSSWFAMLFSAGMGIGLMFFGVAEPVMHFSTPPVGDP 127

Query: 170 LTIAAQREAMSVTFFHWGVHAWAIYSVVGLSLAYFGYRYNLPLTVRSGLYPLLKEGIHGP 229
            T+AA REAM +TFFHWG+HAWAIY++V L LAYF +R  LPLT+RS LYPL+ E I+GP
Sbjct: 128 GTVAAAREAMKITFFHWGLHAWAIYAIVALILAYFSFRNGLPLTLRSALYPLIGERIYGP 187

Query: 230 IGHVVDIFAICGTMFGLATSLGFGILQINSGLNYLLGIPQSIYVQLLLVTVVTAIATISV 289
           IGH VD+FAI GT+FG+ATSLG+G+LQINSG +++ G+P +  VQ++L+T   A+AT+SV
Sbjct: 188 IGHAVDVFAILGTVFGVATSLGYGVLQINSGFHHVFGLPVNTTVQVILITATCALATLSV 247

Query: 290 VTGVEKGVRILSETNLFLAVLLMLFVLVVGPTGTLMRDFVQNIGLYLDSLVLRTFNIYAY 349
            +G++KG+RILSE NL LAV+LMLFVL++GPT  L++ +VQN G YL  +V +TFN+YAY
Sbjct: 248 ASGLDKGIRILSELNLSLAVILMLFVLLLGPTVFLLQTYVQNTGAYLSDIVNKTFNLYAY 307

Query: 350 EPRPWIDSWTLFYWAWWISWSPFVGMFIARISRGRTVREFVTAVLFVPAMFTFLWMTVFG 409
           EP  WI  WTL YW WW+SWSPFVG+FIARISRGRT+REFV  VLFVPA FT LWMTVFG
Sbjct: 308 EPTDWIGGWTLLYWGWWLSWSPFVGLFIARISRGRTIREFVCGVLFVPAGFTLLWMTVFG 367

Query: 410 NTAIYVDTTIANGELARDVKADLSVALFQFFEYLPWPAVTSTLAVLLVSIFFVTSSDSGS 469
           ++AI++       +LA  V  D S+ALF F E+ P+ ++ S +AVL+V +FFVTS+DSG+
Sbjct: 368 DSAIHMILNDGVKDLAAVVSEDSSLALFAFLEHFPFSSIISLVAVLMVVVFFVTSADSGA 427

Query: 470 LVIDTIASGGETATPALQRIFWCSLSGIVAAVLLSTGGLTALQSATISTALPFSLVMLIL 529
           LV+D +AS G+  +P  QRIFW    G VA  LL   GL ALQ+ATI++ALPF++++L+ 
Sbjct: 428 LVVDMLASSGQGHSPLWQRIFWSVCIGAVAIALLLANGLKALQTATIASALPFAVILLVA 487

Query: 530 VWSLFVGMRADLAR--TQSPGSLGPR--AYPASGVPWQRRLAMTLSTPDRRAVEKFLQAS 585
           +W LF  +  D  R   ++    GPR   +P  G  WQRRL      P R  V +F+   
Sbjct: 488 IWGLFKALSLDATRRGLRNQALPGPRHTRHPHGG--WQRRLRNIALMPRRVHVTRFIAEV 545

Query: 586 VLPALEAVARELTRRSRPASVGRDAETGALTLTVPAEGHRDFVYGVQMSEHKLPAFTAYD 645
           V PA E VA+EL ++    SV  + + G ++L +   G   F+Y V+      P+F   D
Sbjct: 546 VRPACEEVAQELRKQGYEVSV-NERDDGRVSLELSHAGEGRFLYEVRPRAFNTPSFVMRD 604

Query: 646 A-TVADVR--YEARTFFSDGSRGYDIMGMADNQIINDVLFQFERYTGFV 691
               AD R  + A     +G + YDIMG + + +I D+L Q+ER+  ++
Sbjct: 605 TEDGADSRKYFRAEVHLREGGQDYDIMGWSRDDVIGDILDQYERHLHYL 653