Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase B from Sinorhizobium meliloti 1021

Subject, 731 a.a., pseudouridine synthase from Rhodopseudomonas palustris CGA009

 Score =  144 bits (363), Expect = 7e-39
 Identities = 107/307 (34%), Positives = 156/307 (50%), Gaps = 22/307 (7%)

Query: 15  DDRQAREEEARHQRKGSRCLCRISGLAPPFMSEEARSNSAETETVKQRRPTAKRRVGDEK 74
           DD ++ +   R    G R   +     P F    A     +     +R+P A  +   +K
Sbjct: 351 DDERSFDRPRRDNEDGGRIFAK----RPAFGGRGAFRK--QDPAASKRKPAAPAK--SDK 402

Query: 75  AGELPGKRVTLARALSKLGYCSRTQAEKLIAEGRVSVAGRKITDLSHWVDIEA-DRIAVD 133
           AGE       +A+ +++ G CSR  AE  I EGRV+V G+ I   S  +D++A D I +D
Sbjct: 403 AGE------RIAKVVARAGLCSRRDAEAWITEGRVTVNGKVID--SPALDVKASDIITID 454

Query: 134 GTVIAAQARVYLML-NKPRGLVTTRDDPEGRPTVFSCLDNVDVPSLSPVGRLDKASEGLL 192
           G  +  + R  L L +KPRGL+TT  DPEGRPTVF  L    +P L  +GRLD  +EGLL
Sbjct: 455 GKPLPERERTRLFLYHKPRGLMTTHSDPEGRPTVFDHLPE-GLPRLISIGRLDFNTEGLL 513

Query: 193 LFTNDTVLAQRLLDPETHLGKVYHVQVRGIFGEAMAARMVEGVTEGGELLRALRVERLKG 252
           L TND  LA+ L  PET   + Y V+  G   +A    +  G+   G     +  +  + 
Sbjct: 514 LLTNDGGLARALELPETGWLRRYRVRAHGEITQAQLDELQNGIEVDGVQYGPIEAKLERD 573

Query: 253 GDRNSWIEIELDEGRNRQIRRMLDVLGFECLRLLRVSIGEIRLGDLPKGASRPLTEAEAL 312
              N W+   + EG+NR++R +L  LG E  RL+RVS G  +L +L +G    + E +  
Sbjct: 574 QGANVWLVFAIREGKNREVRNVLAHLGLEVNRLIRVSYGPFQLLELGEG---EVDEVKTR 630

Query: 313 YLRRRTG 319
            LR + G
Sbjct: 631 VLRDQLG 637