Pairwise Alignments

Query, 588 a.a., DNA damage response helicase (yejH or radD) (from data) from Shewanella amazonensis SB2B

Subject, 1150 a.a., Type-1 restriction enzyme R protein from Alteromonas macleodii MIT1002

 Score = 61.6 bits (148), Expect = 2e-13
 Identities = 102/422 (24%), Positives = 161/422 (38%), Gaps = 109/422 (25%)

Query: 13  IKLRDYQQDAIEATLAHFRTSRESALLVLPTGAGKS-LVIAELARLAKG----RVLVLTH 67
           ++LRDYQ+ AI++     +  +E AL+ + TG GK+   IA + RL K     R+L L  
Sbjct: 425 LQLRDYQKKAIQSVEQAIKDEKERALVAMATGTGKTKTCIALVYRLLKAERFRRILFLVD 484

Query: 68  VKELVAQ-----NAQKVDALAGNASIFSAGLGEK---------DSGGKTVVAGIQSAAVN 113
              L  Q        +++ L   A  F   LG +         D   K  VA +Q     
Sbjct: 485 RSALGVQATIDFGEVRMENLNTFADTFDV-LGMEPEKNPKPTPDDDTKVHVATVQGLVKR 543

Query: 114 VAAFDE--------PFSLVIIDECHRVSL----------------DENSQYRQVFSQLRE 149
           +    E         +  +++DECHR  L                D  S+YR V      
Sbjct: 544 IMYPSEDATKPGVGQYDCIVVDECHRGYLLDRELSETEVKFRDQQDYVSKYRAVIDYF-- 601

Query: 150 KNPDLLLLGLTATPYRLGEGAIYKRHVRGHVGNPDKGVFDVCIFELPIRSLIKQGYLTE- 208
              D   +GLTATP      AI   H     G+P        +F       +  GYL + 
Sbjct: 602 ---DAFKIGLTATP------AI---HTTDIFGDP--------VFSYSYTEAVIDGYLVDH 641

Query: 209 --------PLLLDGLAAQYN------------FAALKASEDADYQEAEV--QAILDTSTR 246
                    L  DG+    N               +   ++ D+  A+   + I    T+
Sbjct: 642 LPPVRIHTKLNTDGIHYNVNEEVQVYDPQTNQLELIHTPDELDFDVAQFNRKVIAPEFTK 701

Query: 247 ATTTIM---GQLKALAQQRLGVIIFAATVRHAKEIMALL------------DESAALITA 291
           A    +     +   +Q++   +IF  T +HA E++  L            D++   IT 
Sbjct: 702 AIAKWLIESDSIDPYSQEK--TLIFCVTDKHADEMVEALKDACEHYHGAVDDDAIMKITG 759

Query: 292 DTPGPERDNIITAFKAQEL-KFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRG 350
            +  P +  +I  +K   L   +V V +LTTG D P +  +  +R   S  L++QM+GR 
Sbjct: 760 ASDKPLQ--LIRRYKNDRLPNIVVTVDLLTTGVDVPSICNLVFMRRVNSRILYEQMLGRA 817

Query: 351 LR 352
            R
Sbjct: 818 TR 819