Pairwise Alignments

Query, 287 a.a., type IV pilus assembly protein PilM (RefSeq) from Shewanella amazonensis SB2B

Subject, 267 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 83.2 bits (204), Expect = 6e-21
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 8/230 (3%)

Query: 35  NSWQFTLLTEALKRSGTNYQISQLSSEMNQKRKVEEALEGNIDVFWSMTSAELERTVLPI 94
           +++   LL  AL   G +  +    + + QKR V+      + + W + + E  +  + +
Sbjct: 35  HAYYHELLARALADQGISLVVETPYTHLPQKRVVKMVENNQLSLTWLLETPERNKKFVHV 94

Query: 95  RVPLFKGLLGNRLLIIREADQGRFAKVKSKQDFSAFR--AGQNRYWPDATIIESNGLPL- 151
            VPL  GL+G R+L+I  + Q R  KV +  +F   R  AG    W D  +  SN LP  
Sbjct: 95  DVPLTNGLIGQRILLIPPSLQSRLDKVSNLNEFRQTRLVAGLGEGWLDIAVWRSNHLPFY 154

Query: 152 ITSYKYKNLYPMLE-GGRFDYLALGAQEIWDELAKHPDPALKVDSHVLLQYRSPAYFFVS 210
           I + +++ LY  L   G  +Y   G  EI+ E   +P   L ++ H+L QY+    F++S
Sbjct: 155 IQNGEWRGLYKKLSVSGAVNYFPRGVTEIYQESILNPH--LAIEQHLLFQYQRDFKFYLS 212

Query: 211 PKRQALAEDLNRGLEAMIADGSFDRMFNQELKIDELYRIAKFNERVIIRL 260
           P+       L + L+A    G    +   E    E   + + ++R +I L
Sbjct: 213 PQAAQYQALLEQALKAAQESGLMREL--TEKYWGESLSLLRLDQRQVIEL 260