Pairwise Alignments

Query, 460 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 478 a.a., Nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2E2

 Score =  317 bits (813), Expect = 4e-91
 Identities = 192/467 (41%), Positives = 269/467 (57%), Gaps = 17/467 (3%)

Query: 2   LAPAQTVLIVDDDEAIRQMLSAFLSKEGLRVVTARDGLEAIEVFRLQRTDVVLLDIRMPR 61
           ++ ++TV IVDDD +IR +L   L +EG+   +       +     Q+ DV++ DIRMP 
Sbjct: 1   MSRSETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPG 60

Query: 62  MNGLEAAKAILEMDRGTAVILMTAFAEVCTAVQAIKDGAFDYVIKPFDLEEIRLLVRRAL 121
            +GL+    I E      VI+MTA +++ +AV + + GAF+Y+ KPFD++E   LV+RA 
Sbjct: 61  ASGLDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRA- 119

Query: 122 EIRSMRADIVSLRRELSERYGAEGILTDNPKMMDLRQTIAKVARSQATVLIQGESGTGKE 181
              +  A       E+        I+ + P M ++ + I +++ S  TVLI GESGTGKE
Sbjct: 120 ---NQHAQEQQGMEEVPALARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKE 176

Query: 182 LVAASVHYGSPRATGPFIRVNCAAIPEGLLESEFFGHEKGAFTGAATRRRGRFEQAEHGT 241
           LVA ++H  SPRA  PFI +N AAIP+ L+ESE FGHEKGAFTGAA  RRGRFEQA+ GT
Sbjct: 177 LVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGT 236

Query: 242 LFLDEIGEISPALQVKLLRVLQEREYERVGGSEPIPADVRIVAATNRDLEAMIREGTFRQ 301
           LFLDEIG++    Q +LLRVL + E+ RVGG  P+  DVRI+AAT+++LE ++  G FR+
Sbjct: 237 LFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFRE 296

Query: 302 DLFFRLNVVALKTIPLRDRPEDIRLLADHFLGRFAADNNVVIRGFDPAALDCMLAYPWPG 361
           DLF RLNV+ +    L DR EDI  LA HFL R A +  V  +       + +   PWPG
Sbjct: 297 DLFHRLNVIRIHIPRLADRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPG 356

Query: 362 NVRELVNAVERAVVMSTGNVILRDDLPENIIC----------GERA--AFVSELLPDGEA 409
           NVR+L N      VM++G  +   DLP  ++            E+A   +  + L  G++
Sbjct: 357 NVRQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALSRGQS 416

Query: 410 IRPLREMASEFETRVIRLALARNGGNRARTAIQLGISRRALLYKLQE 456
              L      FE  +I  AL    G R   A+ LG  R  L  K++E
Sbjct: 417 -SLLDSAVPSFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKE 462