Pairwise Alignments

Query, 694 a.a., flagellar biosynthesis protein FlhA from Rahnella sp. WP5

Subject, 699 a.a., flagellar biosynthesis protein FlhA (RefSeq) from Shewanella sp. ANA-3

 Score =  714 bits (1842), Expect = 0.0
 Identities = 361/685 (52%), Positives = 498/685 (72%), Gaps = 7/685 (1%)

Query: 15  KSGQWQVLAGPILILIILSMMVLPLPPFILDLLFTFNIALSIMVLLVAMFTQRTLDFAAF 74
           K   ++ +  P+L+L  L+M+VLP+PPF+LD+LF+FNIAL+++VLLVA++T R LDFAAF
Sbjct: 14  KLSSFKGIGTPMLVLAALAMIVLPIPPFLLDVLFSFNIALALIVLLVAIYTDRPLDFAAF 73

Query: 75  PTILLFSTLLRLSLNVASTRVILLEGHTGGAAAGRVIEAFGHFLVGGNFAIGIVVFIILV 134
           PT+LL +TLLRL+LNVASTRV+LLEGH GG AAG+VIEAFG  ++GGN+A+G+VVFIIL+
Sbjct: 74  PTVLLVATLLRLALNVASTRVVLLEGHNGGDAAGKVIEAFGSVVIGGNYAVGLVVFIILI 133

Query: 135 LINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSDVTQEADF 194
           +INF V+TKGAGRIAEV ARF LD MPGKQMAIDADLNAG+I +D+A+ RR++VT+EADF
Sbjct: 134 IINFAVVTKGAGRIAEVSARFTLDAMPGKQMAIDADLNAGIINQDQARTRRAEVTREADF 193

Query: 195 YGSMDGASKFVRGDAVAGLMIMIINVVGGLLVGVLQHGMDLGHAAESYTLLTIGDGLVAQ 254
           YG+MDGASKFV+GDA+AG+MI++IN++GG ++G++QHG+    A E YTLLTIGDGLVAQ
Sbjct: 194 YGAMDGASKFVKGDAIAGIMILVINILGGFIIGIVQHGLTFSQAVEIYTLLTIGDGLVAQ 253

Query: 255 IPALVISTAAGVIVTRVGTNEDVGEQMVTQLFRNPRVMMLSAGVLGLLGMVPGMPNFVFL 314
           IP L++S AA ++VTR   + D+G+ +++Q+F + + + ++AGVL ++G+VPGMP+  FL
Sbjct: 254 IPGLLLSIAAALMVTRQNESGDMGQMLISQMFDSHKSLSIAAGVLFVMGIVPGMPHMAFL 313

Query: 315 MF---TAGLLALAWWTRGQELKKPTTAAAAPAVADNGKQMVEASWQDVQLEDPLGMEVGY 371
            F   TAG     +     +  K              ++  E SW DV   D +G+EVGY
Sbjct: 314 SFAVITAGAAYFIFKRNEAKRAKALEQVKTGPTERAEREPKELSWDDVHHVDTIGLEVGY 373

Query: 372 RLIPMVDFAQNGELLGRIRSIRKKFAQEMGYLPPVIHIRDNLELPPAGYRILMKGVEIGT 431
           RLIP+VD  Q GELL RI+ +RKK +QE+G+L P +HIRDNL+L P  YRI + GV +G 
Sbjct: 374 RLIPLVDKGQGGELLSRIKGVRKKLSQELGFLVPAVHIRDNLDLSPNAYRISLMGVVVGE 433

Query: 432 GAAHPGRWMAINPGSAIGELPGEATVDPAFGLAAVWIEPAMREQAQIQGYTVVEASTVVA 491
                   +AINPG   G+L G  T DPAFGL AVWI P +RE AQ  GYTVV+A+TVVA
Sbjct: 434 ADIRHDCELAINPGQVYGKLDGIETRDPAFGLEAVWIAPELREHAQTLGYTVVDAATVVA 493

Query: 492 THLNHLISMHAKELFGRQETQELMERVTKEMPKLTEDFIPGIISLTNMHKVLQNLLSERV 551
           TH++ +++ +A +L G +E Q+LM+ + K  PKL + FIP ++ L N+ KV+QNLL+E V
Sbjct: 494 THISQILTNNAAKLLGYEEVQQLMDMLAKHSPKLVDGFIPDVMPLGNVVKVMQNLLNEGV 553

Query: 552 SIRDMRTIVETLAEYAPNQPDPNELTSVVRVALGRAITQQWFPGSGEVQVIGLDTSLERL 611
           S+RD+RTIV+TL EY     D   LT+ VR+AL R I Q+      E+ VI L   LE++
Sbjct: 554 SVRDLRTIVQTLLEYGTKSNDTEVLTAAVRIALKRMIVQEISGPELEIPVITLAPELEQM 613

Query: 612 LLQALQSGGG----LEPGLAERLLTQSEAALQRQDMLSAPPVLLVNHALRPLLSRFLRRS 667
           L Q++Q+ GG    +EPGLAER+      A Q+Q+M+  P +LL +  LR  LSRF++ +
Sbjct: 614 LHQSMQATGGDGPNIEPGLAERMQQSLADAAQKQEMVGQPAILLTSGMLRATLSRFVKYT 673

Query: 668 LPNIVVMSNLEMSDSRQIRMTATIG 692
           +PN+ V+S  E+ D +QIR+ + +G
Sbjct: 674 IPNLRVISYQEIPDEKQIRIVSAVG 698