Pairwise Alignments

Query, 515 a.a., PAS domain-containing protein from Rahnella sp. WP5

Subject, 542 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  276 bits (706), Expect = 1e-78
 Identities = 178/555 (32%), Positives = 293/555 (52%), Gaps = 58/555 (10%)

Query: 1   MRNNQPISQREYQYPDDATLMSTTDAESRITYANDAFIEVSGFASEDIIGQPHNVVRHPD 60
           M+NN P++Q E  +     ++S TD +  ITYAND F+E+SGF  +++IG+ HN+VRHPD
Sbjct: 1   MKNNLPVTQVEVPFIKGKYIVSKTDLKGIITYANDTFVELSGFTRDELIGKNHNLVRHPD 60

Query: 61  MPPSAFKDMWATLQQGFPWTALVKNRRSNGDHYWVRANVVPIIRGGKTKGYLSVRTKPTT 120
           MPP+AF D+W ++++G PW  +VKNR  NGDHYWV A VVP+ + G+T GY+SVRT+P+ 
Sbjct: 61  MPPAAFADLWISVKEGRPWRGIVKNRCKNGDHYWVDALVVPVRQKGQTIGYMSVRTEPSR 120

Query: 121 AEINATQALYDKMNRGELNNRRLHRGLLIRTGITRSFSILKTLSVRWRIRNGLLVLLVLN 180
           A++ + +ALY K+ +G         G + R G  R  S+ K ++       GL + ++  
Sbjct: 121 AQVQSAEALYAKLGKG--------GGAIPRPGGWRKVSLRKKMA-------GLTLFVMAA 165

Query: 181 SLVIS---------ALTALPVIQMNTALALNAFFILLLNFWMEWQITRPVEQLCSQTLRV 231
            L+             +A  ++ +   L+L       +   ++  I R ++   S   RV
Sbjct: 166 QLLTGIGVWFGSGIGFSADSIVALVQILSLTGLVAGAVQIGLQQGIFRAIDATNSSLDRV 225

Query: 232 ASGASHTITPMERVDEIGMTLRSVGQLGLICRWMVDDVNDQAHKVRTASESLANGNEALS 291
           A G        +R+DE+G    S+       + M+ ++ + A++V   +  L     ++S
Sbjct: 226 AQGDLSEDLWHDRLDEVGKLQDSLLTTQAHLKVMLAEIAEAANRVSGNTTQLNLEMSSVS 285

Query: 292 QRTEQTAANVGQTAAAMNEMSTTVESNTQTAAEADKLSLIASAAAEK----------GSN 341
            ++E  + +V + AA+M EMS TVE   Q +A+A + +       E+          G  
Sbjct: 286 SQSESQSDSVSRIAASMEEMSATVE---QVSADAQETASAVGTTRERIAGVEQRMIQGRE 342

Query: 342 AMQEVV-------GTMQEITGSSRQIATITNVIDGIAFQTNILALNAAVEAARAGEQGKG 394
           A + VV        TM  +  S  +I  +T  I  IA QTN++ALNAA+EAARAGE G+G
Sbjct: 343 ASRAVVSAVDTASNTMATLFQSLNRIGVVTQGIQEIADQTNLIALNAAIEAARAGEAGRG 402

Query: 395 FAVVAGEVRSLAQRS-------ASAASEIKRLIDSSVETVVSGSKQV-------DQAGKT 440
           FAVVA EVR LA+R+       A   +EI+++ +S+V ++ S   QV        + G +
Sbjct: 403 FAVVADEVRKLAERTRLQTAEIAEMVTEIQKITESAVGSIESAGAQVGHNDEAMGETGVS 462

Query: 441 MADIVSQVRNVTSLIGQIRSATGEQNQGLLDIAKAIEELDRITHQNSIQVQEGANASSGL 500
           +A++V   +++  +   I  AT +Q+Q   D+A ++ E+  +  +N+  + E       L
Sbjct: 463 LAEVVQDGQHIDEMARHIAQATVQQSQASQDVAMSVSEIAALIEENAAAIGEAERNVQQL 522

Query: 501 KQQADRLVEAVGVFR 515
              A  L   +  F+
Sbjct: 523 LATAGELRNLIAYFQ 537