Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 371 a.a., molecular chaperone, DnaJ family from Agrobacterium fabrum C58

 Score = 83.6 bits (205), Expect = 7e-21
 Identities = 96/367 (26%), Positives = 146/367 (39%), Gaps = 64/367 (17%)

Query: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDV-----------------------SKER 40
           +D Y ILGV+  A  + IKAA+R  A+  HPD                        SK+R
Sbjct: 2   RDPYSILGVKRDARHEDIKAAWRTKAKTVHPDANRDDPDASARFAEIGQAYDLLKDSKKR 61

Query: 41  DAEEKFKEANEAY----------EVLGDAQKRAEFDEI------------RKYGGQH--G 76
           D  ++ ++A E            E   +A +RA+  E             R   GQ    
Sbjct: 62  DLYDQARQAAEKKKRGETIMQQREAAREAAERAKAAEKLMEELARADARNRAQTGQKTDA 121

Query: 77  RPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGARQQQRSAGRRGQDVEL 136
           +P  A    E   G              +     SA       A    +SA    +    
Sbjct: 122 KPETAEDIVERIFGADAQNDPKVQQAAEAAKAAASAAKGDIPAAGDTAQSAAGDDRTAPA 181

Query: 137 ELAVFLEETLSKE---SKQISFQVPQTNAMGQRTGFTT-------------KTLNVRIPA 180
            LAV L   L +    ++  + +VP   A    T                 + +  ++ A
Sbjct: 182 SLAVNLFNALVRRFRPAQPAAEKVPDITAEATVTVADLLEHKWVTLQLADEREIRFQLEA 241

Query: 181 GVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGA 240
           G+ DG  +RLKGQG       A GDL +T+  A    F + G D+  T+P++  +A LG 
Sbjct: 242 GMADGHIVRLKGQGLK-LPNLARGDLAVTLLAARDDAFSLRGFDIHTTLPISLSDAVLGC 300

Query: 241 KVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERGNLYAQLKVVMPPASDESARE 300
           +  V T  G+ N+TI   S S + LR+ GKGLA+ +G  G+L  +L++V+    DE   +
Sbjct: 301 EAKVATPLGEENITIPAWSGSDRVLRLAGKGLADGKGGSGDLVIELRIVLLEKPDEKVTD 360

Query: 301 LWTKLSE 307
           L   + E
Sbjct: 361 LMRHMRE 367