Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 384 a.a., ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 87/365 (23%), Positives = 145/365 (39%), Gaps = 21/365 (5%)

Query: 14  ASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGVNGKMLE 73
           A ++ +G + S  AA+ IK+G+  S++G M+      K      IE+INA+GGV G+ +E
Sbjct: 12  AVMSGLGYAASALAADPIKIGMFLSVTGQMSPMGDPQKRTFDYMIEKINAQGGVLGRKVE 71

Query: 74  PVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEG 133
            V+ D  S     A   ++L+  DKV ++ G   + +  +VL + E    + +  +    
Sbjct: 72  AVIYDDGSEPEKAATFVKRLIDNDKVDLIIGGSGTPTSMAVLGLIERAE-VPYLSLGGGT 130

Query: 134 EEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRTTNKILRAFLHSK 193
               P   +T   P    + A + L+        +  LL  +  + ++ +          
Sbjct: 131 AIGDPVRKWTFKFPQSDRLAAEKVLVDLKKRGLTKIALLSENVGFGKSGHDQTVKLAPQH 190

Query: 194 GVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDSNVPFYKELANQGLKA 253
           G+ +  I+EVY+P    D        K     G  A+     G       K L   GL  
Sbjct: 191 GI-EILIDEVYSP---KDPDVTPQLTKIRGTAGVQALFIFGTGTGPAVVTKNLRQMGLNL 246

Query: 254 TDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADWKAYAKAKGLPGA 313
                   +  +E LR + T      L A     +   P N    A   A+ K       
Sbjct: 247 PTYQSHGVA-SKEFLRLVGTAADGMRLPAGAQAVAEQLPANDPQKAVTMAFKK------- 298

Query: 314 DKAVTNDPMEATYVGIH------MWAQAVEKAKSTDVDKVREAL-AGQSFEAPSGFTLTM 366
           +    N P+EA  +  H      M   A ++A +TD  KVR+A+   + F A +G   T 
Sbjct: 299 EYEEKNKPLEAGPLPGHGLDALMMAMDAFKRAGTTDKAKVRDAIEQTKGFVATTGI-FTY 357

Query: 367 DKTNH 371
             T+H
Sbjct: 358 SPTDH 362