Pairwise Alignments

Query, 468 a.a., D-alanine, beta-alanine, D-serine, glycine permease from Pseudomonas putida KT2440

Subject, 473 a.a., aromatic amino acid transporter from Pseudomonas simiae WCS417

 Score =  362 bits (929), Expect = e-104
 Identities = 179/463 (38%), Positives = 279/463 (60%), Gaps = 16/463 (3%)

Query: 5   SPIATDEPHLQRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFF 64
           SP ++ E  L+R L NRHIQLIA+GGAIGTGLF+GS   +  AGPS+I  Y I GF+ F 
Sbjct: 4   SPSSSGE--LKRGLKNRHIQLIALGGAIGTGLFLGSAGVLKSAGPSMILGYAICGFIAFM 61

Query: 65  VMRAMGELLLSNLNYKSFIDFSADLLGPWAGYFTGWTYWFCWVVTGIADVVAIAAYTQFW 124
           +MR +GE+++      SF  F+    G +AG+ +GW  W  +++ G++++ A+  Y  +W
Sbjct: 62  IMRQLGEMIVEEPVAGSFSHFAHKYWGGFAGFLSGWNCWILYILVGMSELTAVGKYVHYW 121

Query: 125 FPDLPQWIPALTCVGLLLSLNLVTVKMFGELEFWFALVKIVAILGLVATGLYMVITGFTS 184
           +P++P W+ A     L+  +NL  VK+FGE EFWFA++K+VAI+G++A G Y++++G   
Sbjct: 122 WPEIPTWVSAAAFFVLINLINLANVKVFGEAEFWFAIIKVVAIVGMIALGSYLLVSGTGG 181

Query: 185 PSGRTAQLANLWNDGGMFPHGLMGFFAGFQIAVFAFVGIELVGTTAAEAKNPERTLPRAI 244
           P    A + NLW  GG FPHG+ G      I +F+F G+E++G TAAEA  P   +P+AI
Sbjct: 182 PQ---ASVTNLWEHGGFFPHGVGGLVMAMAIIMFSFGGLEMLGFTAAEADKPRTVIPKAI 238

Query: 245 NSIPIRIIVFYVLALIAIMAVTPWRDVVP---------GKSPFVELFVLAGLPAAASIIN 295
           N +  RI++FY+ AL+ ++++TPW  ++            SPFV++F + G   AA I+N
Sbjct: 239 NQVIYRILIFYIGALVVLLSLTPWDSLLATLNASGDAYSGSPFVQVFSMLGSDTAAHILN 298

Query: 296 FVVLTSAASSANSGVFSTSRMLYGLSQEGDAPKAFEKLSSRSVPANGLYFSCTCLLLGAV 355
           FVVLT+A S  NSG +  SRML G++++GDAPKA  K+  R VP   +  S    L+  +
Sbjct: 299 FVVLTAALSVYNSGTYCNSRMLLGMAEQGDAPKALAKIDKRGVPVRSILASAAITLVAVL 358

Query: 356 LIYLVPNVVEAFTLVTTVSAVLFMFVWTLILLSYLKYRKDRAALHQASNYKMPGGRFMCY 415
           + YL+P    A  L+ ++     +  W +I  S+ K+R+      Q   +K     +  Y
Sbjct: 359 MNYLIPQ--HALELLMSLVVATLVINWAMISFSHFKFRQHMNRTGQVPLFKALWYPYGNY 416

Query: 416 VCLSFFAFILVLLSLEADTRSALVVTPIWFVVLAVTYQLVRSR 458
           VCL+F  FILV++ +    + ++   P+W + +AV Y +   R
Sbjct: 417 VCLAFVVFILVIMLMIPGIQVSVFAIPVWVMFMAVCYGIKNKR 459