Pairwise Alignments

Query, 319 a.a., Ribonuclease Z from Pseudomonas putida KT2440

Subject, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

 Score =  142 bits (357), Expect = 1e-38
 Identities = 97/314 (30%), Positives = 153/314 (48%), Gaps = 12/314 (3%)

Query: 1   MDLLFLGTSAGVPTKARNVSATAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI 60
           M + FLGT A +PTK R  +  ++        +L DCGE TQ +++ T +S   +  IFI
Sbjct: 1   MKITFLGTGAAIPTKYR--AHPSISLKFDGEIFLFDCGENTQRQIIFTDVSPMKINNIFI 58

Query: 61  THVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQGLVASDTFLPFELRLLPVE 120
           TH+HGDH  GLPGLL S    GR +PL +  PA     +   L      + + + +  + 
Sbjct: 59  THLHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHEIS 118

Query: 121 ELIAWR---SETLQVTTVQLSHRVPSVGFVFTEINPEPRLDIQRLDAEGITRGPLWGELA 177
                R   +   +V +  + H VP++ +VF ++  +PR+D++++   GI  GP    L 
Sbjct: 119 SKTPERIIFTNNYEVFSYPVVHSVPALAYVFKQVK-KPRMDLEKVKKLGIEIGPDLKRLK 177

Query: 178 KGLTVTYDGQLLNGNDYLRPSRPPRRVIVCGDNDKPELLAAVAR--GADVLVHEATFTQA 235
            G  V  +G+++  ND   P +    V   GD    +  A   +    + L+HEATF + 
Sbjct: 178 DGFNVELNGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFLKELKCNTLIHEATFDK- 236

Query: 236 VVERTGGTFGHSTAAEVARFAEAAGVRNLVLTHFSARYQNDPRRSPHIDNVRDEALAHYS 295
            +ER      HSTA +    A+ +GV  ++LTH SARY N       I   + E   +  
Sbjct: 237 TMERNAKETLHSTATDALNIAKLSGVSTVLLTHISARYDNLNAFENEIVEFKAE---NPE 293

Query: 296 GQLTLAQDLQRYHL 309
             + +A+DL  Y L
Sbjct: 294 IHVLIAEDLMEYSL 307