Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 24/261 (9%)

Query: 35  WHRLEPGHVIALVAALRADGFAPNSSSLYVNAIRGVMNEAWRQGLIDHEQLLRIREVKPA 94
           W +L+   V  LV   +  G   +S +  ++++R  ++    +G +         +  PA
Sbjct: 57  WTQLDSAWVRQLVMQGKRQGMKASSIATRLSSLRSFLDFLILRGEL---------QANPA 107

Query: 95  TGSRLPPG-----RNLRRSLIRELMDVCAADPRPQGVRDAAIIALLYGTGMRKSESVDID 149
            G   P       +NL    + +L++V   D  P  +RD AI+ L+YG G+R +E V ID
Sbjct: 108 KGVSAPRKQRTLPKNLDVDEMAQLLEV--TDDDPLSIRDRAIMELMYGAGLRLAELVSID 165

Query: 150 LDQVDFEARSLQVVGKGNHQLVKYAPPWAFEKLQAWLELRRQDLPAGAEDDPFLFNRIRR 209
           +  V+     ++V+GKGN +   +    A E +  WL+LR Q L   AE   F+    + 
Sbjct: 166 IKDVNLSEGEIRVIGKGNKERKVWFAGQAQEWVGKWLKLRSQ-LADSAETALFV---SKL 221

Query: 210 GNHITRARITKHAIYYIARQRGAQVGVKIMPHDFRRAFITRVIE-EHDLSIAQKLAHHAN 268
           G  I+   + K    +  +Q    V   I PH  R +F T ++E  ++L   Q+L  H N
Sbjct: 222 GTRISHRSVQKRMAEWGQKQ---AVASHISPHKLRHSFATHMLESSNNLRAVQELLGHEN 278

Query: 269 IQTTAIYDRRDDNERRRAVDR 289
           I TT IY   D     +  D+
Sbjct: 279 IATTQIYTHLDFQHLAQVYDQ 299