Pairwise Alignments

Query, 513 a.a., putative Multidrug efflux MFS transporter from Pseudomonas putida KT2440

Subject, 512 a.a., multidrug effux MFS transporter subunit EmrB from Klebsiella michiganensis M5al

 Score =  112 bits (281), Expect = 2e-29
 Identities = 105/499 (21%), Positives = 200/499 (40%), Gaps = 33/499 (6%)

Query: 26  GLQVVVGLFGVLLAVLCAGLNESVTKISLADIRGAMGIGADEGAWLLAVYSAASVSAMAF 85
           G Q+V+    + LA     L+ ++  +++  I G +G    +G W++  +  A+  ++  
Sbjct: 9   GAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVANAISIPI 68

Query: 86  APWLATTFSLRRFTMSAVGLFAVLGLLQPFAPNLHSLMLLRVLQGFAAGALPPMLMSVAL 145
             WLA      +  + +   FA+       + +L  L+  RV+QG  AG L P+  S+ L
Sbjct: 69  TGWLAKRVGEVKLFLWSTVAFAIASWACGMSNSLTMLIFFRVIQGIVAGPLIPLSQSLLL 128

Query: 146 RFLPPGIKVYGLACYALTATFGPNLGTPLAGLWTEYVGWQWAFWQIILPSLLAMVCVGWG 205
              PP  +   LA +++T    P  G  L G  ++   W W F+  +   +  +V     
Sbjct: 129 SNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGIAVVVMTLQT 188

Query: 206 LPQDPLRLERFKQFDWRGVLLGLPAISCTVLGLSLGDRWGWFDSPLICWLLGGGLLLLVL 265
           L     R E+ ++ D  G+ L +  I    + L  G    WF S  I  L    ++ +  
Sbjct: 189 LRNRETRTEQ-RRIDGVGLALLIIGIGSLQVMLDRGKELDWFASNEIIILTIVAVVAISF 247

Query: 266 FMYNEWSEPLPFFQLRLLQRRNLSFALVTLAGVLVVLSGVGSIPSAYLAQIQGYRPAQTS 325
            +  E ++  P   L L + RN +   + ++   ++  G   +    L ++ GY      
Sbjct: 248 LIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAG 307

Query: 326 PLMMLVAMPQLIALPLTAALCNIRAVDCRWVLGIGLAMLAVSCV--------GSSLLTSE 377
                V +  +I  P+     +   +D R ++     M AV           G     S 
Sbjct: 308 LASAPVGVIPVILSPIIGRFAH--KLDMRRLVTFSFIMYAVCFYWRAWTFEPGMDFGASA 365

Query: 378 WIRGDFYPFYLLQVFGQPMAVLPLLMLSTNGMTPQEGPFASSWFNTVKGLAAVIAGGLLD 437
           W +        +Q F      +PL  ++ +G+ P+    ASS  N  + LA  I   +  
Sbjct: 366 WPQ-------FIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITT 418

Query: 438 VLGTLRRHFH--------------SNHLVDSLGNAPLVDGNAAG-LAKRIHDQAQVLTSA 482
            + T R   H              +  + D L    +    A+G +A++I +Q  ++++ 
Sbjct: 419 TMWTNREALHHAQLTESVTPYNPNAQQMYDQLQGLGMTQQQASGWIAQQITNQGLIISAN 478

Query: 483 DLYLVLACIAVALICLIPF 501
           +++   A I + L+ L+ F
Sbjct: 479 EIFWFSAAIFILLLGLVWF 497