Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 547 a.a., peptide ABC transporter substrate-binding protein SapA from Klebsiella michiganensis M5al

 Score =  315 bits (806), Expect = 4e-90
 Identities = 176/528 (33%), Positives = 277/528 (52%), Gaps = 11/528 (2%)

Query: 21  LALVALLLGGATQLAAKP---------LVVCTEASPEGFDIVQYTTAVTADASAETVFNR 71
           LA V++L G A    A P          V C       F+  + ++ +  D  A  +++R
Sbjct: 9   LAAVSMLCGQAFAAPALPAHADIRDSGFVYCVSGQVNTFNPQKVSSGLIVDTLAAQLYDR 68

Query: 72  LVDFKPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLN 131
           L+D  P T  + P LAE W++  +G TY FHLR  V F TT +FKPTR+ NADDV+++  
Sbjct: 69  LLDVDPYTYRLVPELAESWEVLDNGATYRFHLRNNVPFQTTAWFKPTRNFNADDVIFTFG 128

Query: 132 RQLDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFT 191
           R  + +HPWH+     +PYF+S+ F + ++SV K D H+V   L RP+A FL  +A  + 
Sbjct: 129 RIFNRDHPWHNVNGSSFPYFDSLQFADSVESVRKLDSHSVEFRLKRPDASFLWHLATHYA 188

Query: 192 SIYSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALV 251
           S+ SAEY  +L +S +   ++ +P+GTGPF    Y     +R + +P Y+RGKP    +V
Sbjct: 189 SVMSAEYAAKLAQSDRQEMIDRQPVGTGPFQLAEYRSGQYIRLQRHPAYWRGKPLMPQVV 248

Query: 252 FAIAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKY 311
             +      RL KL   EC V  +P    +  ++ DP+L++     +   ++A NT    
Sbjct: 249 VDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNIAWLAFNTAKPP 308

Query: 312 LNDVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARAL 371
           L++  VR A+ +A + Q  +  ++  G A    +  P     Y+   +    +  +ARA 
Sbjct: 309 LDNPEVRHALALAINNQRLMQSIY-YGTAETAASMLPRASWAYDNEARITEYNPTEARAR 367

Query: 372 LSQAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAK 431
           L   G+ E   + L+        NP+P  +AE++QAD+ QIG+K+ I  +E      R  
Sbjct: 368 LKALGL-EKLTLKLWVPTSSQAWNPSPLKTAELIQADMAQIGVKVIIMPVEGRFQEARLM 426

Query: 432 NGEADLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDE 491
           +   DL  +GWA D+ DPD+F  PLLSC A+ S  NYA WC+ +F E++ +A        
Sbjct: 427 DMNHDLTLSGWATDSNDPDSFFRPLLSCAAIASQTNYAHWCHREFDEVLQKALTSQQLAS 486

Query: 492 RARLYNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPLTNNNFA 539
           R   Y EA ++  DE P + +A      A R +++G V++P  N +FA
Sbjct: 487 RIEAYKEAQRILADELPVLPLASSLRLQAYRYDMKGLVLSPFGNASFA 534