Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 80.5 bits (197), Expect = 3e-20
 Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 34/268 (12%)

Query: 8   LLGAGLVLLATATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVDVAKA 67
           +L A L+ L +A+ A          +++E+  V+  +Y PF +++++NQ+ G+DVD+A A
Sbjct: 4   ILLASLIGLVSASAA----------AQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANA 53

Query: 68  VADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPAVIVV 127
           +  +L  K      ++D +       RYD  I +M  ++AR E  +F   YY + A  V 
Sbjct: 54  LCKQLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVS 113

Query: 128 NASDERIHDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPYDTEN 187
            A   ++ D   L+G++VG  + S+++S+L + L                V A PY +  
Sbjct: 114 LAG--KVADQAALKGKRVGVQNGSTHQSFLLEQL--------------SDVVAVPYSSYQ 157

Query: 188 VAFQDLGLGTGVRLDAIITNLVTAQPRLQQDKRFKLAG-----APLYEEPNAVAIEKGDP 242
            AF D+  G   R+D++  +        + D      G     A  +     +A+ K + 
Sbjct: 158 DAFIDMKNG---RIDSVFGDTAVVAEWFKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 243 EWDAKVREVFAELKADGTLAKLSQKWIG 270
               ++      +K +G  A +  K+ G
Sbjct: 215 ALLDQLNAALEAVKENGEYAAIFNKYFG 242