Pairwise Alignments

Query, 1004 a.a., DNA polymerase III subunit alpha from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1163 a.a., DNA polymerase III subunit alpha from Azospirillum sp. SherDot2

 Score =  290 bits (741), Expect = 5e-82
 Identities = 243/898 (27%), Positives = 403/898 (44%), Gaps = 116/898 (12%)

Query: 3   LNVHSSYSLKYGTLNIEQLIATARNLGIHQMVLTDINNSTGAVEFIRECYKQGIAKEADE 62
           L VHS+YSL  G + +++L+       +  + +TD  N  GA+EF       G+      
Sbjct: 9   LRVHSAYSLSEGAIKVKELVKLCLKQQMPAVAVTDTGNLFGALEFALAASDAGLQPIIGT 68

Query: 63  I----HKGNIPYQIKP-VAGIEFRVDHKLLYVGVAKNREGMRELNEFLSHHNINHIPL-- 115
           +      G  P Q KP + G       +L+ +   +N EG R L   +S   +   PL  
Sbjct: 69  VLGITRVG--PAQTKPGLPGKAAATPDQLVLL--CQNEEGYRNLAALVSKAFLESDPLAG 124

Query: 116 PQIPPEMENVY-----------------IIYPFQKSF--------NTVLKGNEFIGIRAK 150
           PQ+  +  + +                 +++  QK            +  G  ++ ++  
Sbjct: 125 PQVTLDALDGHSAGLIALTGGPGGSVGRLLHEGQKDLALDVLERLKRLFPGRLYVELQRH 184

Query: 151 Q-----------------LNLLYKHPLLKQKEKLLVWHPVTISDKITYRLHQYLRAIELN 193
           +                 ++L Y H L      L+  +    +    Y  H  L  I   
Sbjct: 185 EGGRGHFAAAENAIEPALIDLAYAHDL-----PLVATNDCYFATADMYEAHDALMCIAEG 239

Query: 194 TLLTKVPDEQKCDPDEFLIPEVELTQQFEQYPFIVQNTQRLLNSCDLSVYFEDGPAPVSK 253
             L++  D ++  PD       E+   F   P  + NT  +   C    +      P+  
Sbjct: 240 AYLSQ-EDRRRLTPDHRFKSAEEMRLLFADLPEALDNTVAIARRCS---FLLKPIKPILP 295

Query: 254 NKFFYTGDFEGDKKMLRELAEEGLRYRY--------------GENNTEAIERLEKELRII 299
                 G  E D+  LR  +  GL  R                E      ERLE EL +I
Sbjct: 296 PFACEGGRTEDDE--LRAQSRAGLEMRLEKVVYTPDMTPEQRAETRRTYFERLEFELDVI 353

Query: 300 ELKNFCAYFLITYDIVRYAMTECGFYHVGRGSGANSIVAYCLRITDVDPIDLDLYFERFL 359
               F  YFLI  D +++A  +      GRGSGA S+VA+ L ITD+DP+   L FERFL
Sbjct: 354 VKMKFPGYFLIVSDFIKWAKNQDIPVGPGRGSGAGSVVAWALTITDLDPLRFGLLFERFL 413

Query: 360 HEKRTSPPDFDIDFSWDEREVIQRYIFERYPKWHVAFLGTMSTFKDRAIIREIGKVLGLP 419
           + +R S PDFDIDF  D RE + RY+  +Y    VA + T    + RA++R++G+VL +P
Sbjct: 414 NPERVSMPDFDIDFCQDRREEVIRYVQNKYGYDRVAQIITFGKLQARAVLRDVGRVLQMP 473

Query: 420 KGEIDSF-----TDPTK--------ERENLL------NATYQKLLAVYQYMKGMPNQRSI 460
            G++D        +P          + E +L      + T + L+ +   ++G+    S 
Sbjct: 474 YGQVDKICKMVPNNPANPVTLQQALDSEEMLRQARDGDDTVRHLIDIALKLEGLYRHAST 533

Query: 461 HAGGILISEEPITYYTALDMPPKG-FPTVQWDMYEAEAIGYEKFDILSQRGIGHIREAVQ 519
           HA G++I++ P+     L   P+   P  Q++M   E  G  KFD L  + +  ++ AV 
Sbjct: 534 HAAGVVIADRPLQELVPLYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKTAVD 593

Query: 520 LI-KKNKAKDIDIHDFKTFKNDQKLNGILKEGQPIGCFYIESPAMRQLLKKLKCDNYLTL 578
           LI +K     + + D K+++       +L   +  G F +ES  MR +L++LK +    +
Sbjct: 594 LIPEKPDLTTVPLDDEKSYQ-------LLSRAEATGVFQLESSGMRDVLRRLKPNRLEDI 646

Query: 579 VAASSIIRPGVASSGMMKAYIERYHAPEKVVYLCEVMKQRLSETYGVMVYQEDVIKVCHY 638
           +A  S+ RPG   +  +  YI   +  EK  Y+ + ++  L ET+G+M+YQE V+++   
Sbjct: 647 IALVSLYRPGPMDN--IPKYIRVKNGEEKADYMHDSLEGILKETFGIMIYQEQVMQIAQV 704

Query: 639 FAGLDLADADVLRKAMSGKYRSKLAFDELVNKFFASARKEGHSEELITEVWRQISSFAGY 698
            +G  L  AD+LR+AM  K + ++  D     F   A   G   +L + ++ Q+  FAGY
Sbjct: 705 LSGYSLGGADLLRRAMGKKIKEEM--DNQRKIFCDGAESRGVKADLASMIFDQVMKFAGY 762

Query: 699 SFSKAHSASFAVESYQSLYLKTYYPMEFMVAVLN-NYGGFYSRWVYVHELQKTGARVHLP 757
            F+K+H+A++A+ +Y + YLK  +P+EFM A +  + G      V+  EL +   R+  P
Sbjct: 763 GFNKSHAAAYALVAYHTAYLKANHPVEFMAASMTLDLGNTDKLNVFRQELARLRVRLLTP 822

Query: 758 CVNHSDDVVNIK----GEDAY-LGFIAVQGLEEKNIKIIPAERHTNGLYIDLEDFVKR 810
            +N SD +  ++    G  A      AV+G+ +  +K +  ER  NG +  L DF +R
Sbjct: 823 DINKSDAIFGVEQLADGTKAVRYALAAVKGVGQPAMKAVVEERRKNGPFKSLFDFARR 880