Pairwise Alignments

Query, 520 a.a., L,D-transpeptidase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 444 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 81.6 bits (200), Expect = 5e-20
 Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 32/217 (14%)

Query: 216 ADAESEKRILLLNMERFRWKMPETGDNYVQVNIPDFRLTWLDKTDTVITMKVCVGGKREN 275
           A+A +  R   + M  FR   P   DN + VN+ +   T +   +  +TM+  VG     
Sbjct: 139 AEAAALMRQSAVAMRSFRDTAP---DNILVVNLTNQTTTLVRGGEEELTMRAIVG----- 190

Query: 276 GYEDKLKAFAKSGNLDDKPKNHETPLLFSKINSIQANPIWNIPVSIAQSE-IYWMARKDP 334
                            +P + ETPLL  +I  +  NP W +P ++ + + +  +  K  
Sbjct: 191 -----------------RP-SRETPLLTDRITHVIVNPTWTVPPTVLKEDKLPNLRAKGT 232

Query: 335 YYLSNSNIKVYYKDKLIGEPDTINWNRYSRDKLPFKFKQGSGGGNALGKFKFIFDNSSSI 394
             + N+   + Y D     P+T++W+  +  ++  +  Q  G  NALG+F+F   N   I
Sbjct: 233 PGIQNA---IVYLDGQEVAPETVDWHDVTPGRV--RIVQQPGDHNALGRFRFNLTNPYDI 287

Query: 395 YLHDTNNKNGFNLSNRAISHGCVRIEKPLEFAELLVK 431
           YLH TN    F    R+IS GCVR+E P + AELL++
Sbjct: 288 YLHGTNEPRLFARELRSISSGCVRLEDPRKLAELLLQ 324