Pairwise Alignments

Query, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella loihica PV-4

Subject, 438 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  359 bits (922), Expect = e-104
 Identities = 209/434 (48%), Positives = 277/434 (63%), Gaps = 25/434 (5%)

Query: 8   IVLGLGATGLSVVRYLIKQGITPLVMDSRENPPGRETLSQEFPEVLLLTGGFDCRYLVQA 67
           +++GLG TGLS V + + +G+TP VMD+R  PPG + L QE    +   GG +  +L+ A
Sbjct: 10  VIIGLGLTGLSCVDFFLARGVTPRVMDTRVTPPGLDKLPQEVERHV---GGLNDEWLLAA 66

Query: 68  SQIVVSPGIPLDTAEVRAAVDMGIDIVGDVELFARALADRPACVIGITGSNGKSTVTTLV 127
             IV SPGI L    + AA   G++IVGD+ELF R   +  A ++ ITGSNGKSTVTTLV
Sbjct: 67  DLIVASPGIALAHPSLSAAASAGVEIVGDIELFCR---EAQAPIVAITGSNGKSTVTTLV 123

Query: 128 GEMAAKAGLKVAVGGNIGVPVLDLLDGDHELFVLELSSFQLETTSSLNCISATCLNISED 187
           GEMA  AG+ V VGGNIG+P L LLD D EL+VLELSSFQLETTSSL   +AT LN++ED
Sbjct: 124 GEMAKAAGVNVGVGGNIGLPALMLLDADRELYVLELSSFQLETTSSLQAAAATVLNVTED 183

Query: 188 HMDRYS-DLESYRQAKLRLYDQTKLAIFNRDDLLTRP---------NEPMNQNSFGLSLP 237
           HMDRY   L+ YR AKLR+Y++ K+ + N DD LT P         +  +N   + L+  
Sbjct: 184 HMDRYPFGLQQYRAAKLRVYEKAKVCVVNADDALTMPVRGADERCVSFGVNMGDYHLNRQ 243

Query: 238 EGDEWGVNHGVLVHGTTEYVAGAQVSLVGSHNQANLLVAMALADSAGVDKAAMVEVAKQF 297
           +G+ W    G  V    E      + L G HN  N L A+ALAD+ G+ +A+ ++    F
Sbjct: 244 QGETWLRVKGEKVLNVKE------MKLSGQHNYTNALAALALADAVGLPRASSLKALTTF 297

Query: 298 KGLAHRCELVGKHQGVSYVNDSKATNVGATIAALQGLSDHEGQIILIAGGDGKGADFSTL 357
            GLAHR +L  +H GV ++NDSKATNVG+T AAL GL   +G + L+ GGDGK ADFS L
Sbjct: 298 TGLAHRFQLALEHNGVRWINDSKATNVGSTEAALNGL-HVDGTLHLLLGGDGKSADFSPL 356

Query: 358 RGALLGVG-QVITLGKDGDRIAE-QFDGAIRVESMQEAVAQAAQLAKPGDLVLLSPACAS 415
              L G   ++   G+DG ++A  + + A + E+M+EA+   A   +PGD+VLLSPACAS
Sbjct: 357 TRYLTGDRIRLYCFGRDGAQLAALRPEIAQQTETMEEAMRLLAPRVQPGDMVLLSPACAS 416

Query: 416 LDMYANFMARGDDF 429
           LD + NF  RGD F
Sbjct: 417 LDQFKNFEQRGDVF 430