Pairwise Alignments

Query, 261 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 334 a.a., dipeptide ABC transporter ATP-binding subunit DppF from Escherichia coli ECRC100

 Score =  238 bits (608), Expect = 9e-68
 Identities = 112/226 (49%), Positives = 168/226 (74%), Gaps = 3/226 (1%)

Query: 29  ALEPISFELNRGETLAIVGETGSGKSTLARILVGAEQRTDGEILFEGEAL---ESRNLKQ 85
           AL+ +SF L RG+TLA+VGE+G GKSTL R+L   E  T GE+ ++G+ L   + +  K 
Sbjct: 37  ALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKL 96

Query: 86  RCRLIRMIFQDPNTSLNPRLTVGELLDEPLRFNTDLDKQARFAQVVDTLRKVGLLPEHAD 145
           R + I+++FQ+P  SLNPR  +G++L+EPL  NT L K+ R  + +  + KVGL  EH D
Sbjct: 97  RRQKIQIVFQNPYGSLNPRKKIGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYD 156

Query: 146 FYPHMISEGMKQRVAVARALMLNPKIIIADEALTALDLSVRSQILNLLLKLQQEMGLSYI 205
            YPHM S G +QR+A+AR LML+P ++IADE ++ALD+SVR+Q+LNL++ LQQE+GLSY+
Sbjct: 157 RYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYV 216

Query: 206 FVSHNMNIIRHFSDKIMVLHQGKMVEKATTEKLFNAPEHEYTQRLI 251
           F+SH+++++ H +D++MV++ G+ VEK T +++FN P H YTQ L+
Sbjct: 217 FISHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALL 262