Pairwise Alignments

Query, 415 a.a., tetratricopeptide domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 415 a.a., TPR domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  601 bits (1550), Expect = e-176
 Identities = 291/415 (70%), Positives = 354/415 (85%)

Query: 1   MQKVNTLAAALLLAIGGSLVVAPAANAAEKCPIEKRQSKAVGQSSAKKVQKSFEAYQEGN 60
           M+  + +A ALLL++ G  +   +A AAEKC ++ RQSKAVG+SSAKKVQKSFEAY  G 
Sbjct: 1   MRNAHKIAVALLLSLCGGSLSVSSAIAAEKCAVDTRQSKAVGESSAKKVQKSFEAYSNGQ 60

Query: 61  IDEAIAVLLEASPRDAFDKAYIARMLGNFYAEKNQMGTAIKYLKQAVDADVLGGTDHGAT 120
           +DEAIA+LLEA+P++ FDKAY+ RMLGNFYAEK +M TAIKYLKQAV+AD+LGGTDH AT
Sbjct: 61  LDEAIAILLEANPKNDFDKAYVGRMLGNFYAEKGKMDTAIKYLKQAVEADILGGTDHAAT 120

Query: 121 LRLYADLLIQEKKFKESIPYYYEWMKFTCKEDPQVYRRIGIAYSELKEWDKVLGVVDKGL 180
           LRLYADLL+QEK+FKE+IPYYY+WM+FTCK D Q+YRRIGIAYSELK+WDKV+ V DKGL
Sbjct: 121 LRLYADLLLQEKQFKEAIPYYYKWMEFTCKTDSQMYRRIGIAYSELKQWDKVIEVADKGL 180

Query: 181 SISTKPDKGLYQMKLTAYFNKKDYKNAIKVLETMVPLFQEDGRLWVQLAQFYLMTESYDK 240
           S++  PDKGLYQMKLT+YFN+K YKNA+ VLETMVPLF +DGRLWVQLAQFYLM E YD 
Sbjct: 181 SLAESPDKGLYQMKLTSYFNQKKYKNAVGVLETMVPLFPDDGRLWVQLAQFYLMIEDYDN 240

Query: 241 SLATYDLAYKNGFLETSGNITRLSQLLAQNGSPYRAAKIYEKHMKSGLIKEDEKTFSILG 300
           +LATYDLAY+NGFL+T  NITRL+QL+AQ G+PY+AAK++EKHMKSGLI +D K++ IL 
Sbjct: 241 ALATYDLAYRNGFLDTGANITRLAQLMAQKGAPYQAAKVFEKHMKSGLITQDVKSYEILA 300

Query: 301 GFYHNAKELKEAADYYGKAAAINNDGKLYLKQARLLTLQEKHKEAIPVLKKALAAGGVSE 360
           GFY NAKE KEAA+ YGKAAAI+NDGKLYLKQ RLL+L+EK+ EAIPVL+KA++ G    
Sbjct: 301 GFYQNAKEFKEAAELYGKAAAISNDGKLYLKQGRLLSLEEKYSEAIPVLEKAISLGIEHP 360

Query: 361 GEVEFELTLAYLGTKQIKAAYNACLKAAKDEKTKRSATSYLAYIKEKARIYNVAL 415
           GE  FEL LA+L  KQ K+AYN  + AAKD+KT++SA SY++YIKEKAR++NV L
Sbjct: 361 GEANFELALAHLSLKQYKSAYNRAVLAAKDKKTEKSANSYISYIKEKARMHNVTL 415