Pairwise Alignments

Query, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 426 a.a., RNA helicase CrhR from Azospirillum sp. SherDot2

 Score =  292 bits (748), Expect = 1e-83
 Identities = 157/401 (39%), Positives = 246/401 (61%), Gaps = 5/401 (1%)

Query: 16  FSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLPAMQR 75
           F+D  +  ++  +L   G  TPT +Q  +IP  L+GRD++A+++TG+GKT AF+LPA+ R
Sbjct: 11  FADLGIHSKIAQALGEHGYTTPTPVQAAAIPPALAGRDILATAETGTGKTAAFMLPALTR 70

Query: 76  VIATKALSKRDPRVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENFNDQAKALAR 135
           V          PR+L+L PTRELA+QV    R      +   I ++GG  + +Q + L+R
Sbjct: 71  VAEMPVPGIAAPRILVLAPTRELASQVTQAARKYARPLRMNIIDVVGGMPYGEQLRMLSR 130

Query: 136 DPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQAADHKRRQT 195
             H VVATPGRL DH+ ++ + L+ +E+LILDEADRMLD+GF + +  I  A     RQT
Sbjct: 131 PVHVVVATPGRLIDHIDRQRIDLSAVEVLILDEADRMLDMGFLDDVERIADAC-KADRQT 189

Query: 196 LMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHKEQLLTRLLQ 255
           L+F+ATLD  ++ ++A +LL+ PE VA+  S     ++ Q+++  D++ HK +LL     
Sbjct: 190 LLFTATLDR-RMGQLAGKLLRNPERVAV-ESQATAINVEQRLHHADDMDHKRRLLMHFAG 247

Query: 256 LEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSRGQQQILVT 315
            E   + IIF AT+ D D LA  L+  G + ++L G++ Q+ RN+ + +   GQ ++LV 
Sbjct: 248 QEEVGKAIIFAATKRDADALAEELSAAGHAAAALHGDMDQSKRNRTLQRLRTGQVRLLVA 307

Query: 316 TDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPKDWVNFKQVQ 375
           TDVA+RG+D+ +++ VINFD+P+ AE+Y+HRIGRTGRAGA G A+S     D     +++
Sbjct: 308 TDVAARGIDVRDITHVINFDLPRSAEDYVHRIGRTGRAGASGIAVSFASRSDRDTLSRIE 367

Query: 376 NFLRKSFEFSELEELAPK--FKGLKDKPSQEKRLGKQQAKP 414
            F   +     +  + P+  F G   +P+     G+  A+P
Sbjct: 368 RFTGATLAIHTISGMEPQRSFSGGGGRPAGRPAGGRGGARP 408