Pairwise Alignments

Query, 828 a.a., ribonuclease R from Dechlorosoma suillum PS

Subject, 876 a.a., Ribonuclease R from Pseudomonas lactucae CFBP13502

 Score =  763 bits (1970), Expect = 0.0
 Identities = 426/853 (49%), Positives = 543/853 (63%), Gaps = 55/853 (6%)

Query: 13  DPFFERECQKYEIPLPSREYTMQLLQDQGRPVSFDQLVALLDISRDEE-DLFQRRLNAME 71
           DP   RE +KYE P+PSRE  +  L D+G P S +QLV    ++ +++ +  +RRL AME
Sbjct: 8   DPEAAREAEKYENPIPSRELILAHLADRGSPASREQLVEEFGLTTEDQLEALRRRLRAME 67

Query: 72  RDGQLLRNRKNSYILPEKADLIPGKVEGHPDGFGFVKPDDGSDDLFLEPKQMDKVLHGDR 131
           RD QL+  R+ +Y   +K DLI G++ GH DGFGF+ PDDGSDDLF+ P QM  V  GDR
Sbjct: 68  RDAQLIYTRRGTYAPVDKLDLILGRIAGHRDGFGFLIPDDGSDDLFMSPAQMRLVFDGDR 127

Query: 132 VLVRCIGLDRRGRREATIVEVLERANTRLVGRLMEEHGIQFVVAENKRISQDILIPPTAM 191
            L R  GLDRRGRRE  IVEV+ RA+  +VGR  EE GI FVV +N ++ Q++LI P   
Sbjct: 128 ALARVSGLDRRGRREGVIVEVVSRAHESIVGRYFEEGGIGFVVPDNPKVQQEVLITPGRN 187

Query: 192 TDKRAKLKARPGNVVMVEILEQPSRYSQPIGRIVEILGNYADPGMEIEIALRKHDLPFEF 251
                   A+ G  V V+I   P+   QP G IVE++GNY  PGMEI++ALR +D+P  +
Sbjct: 188 G------AAKVGQFVEVKITHWPTARFQPQGDIVEVVGNYMAPGMEIDVALRTYDIPHVW 241

Query: 252 SKEAQAENKAVPDKVKKSDFKGREDLRELPLVTIDGETARDFDDAVFCE-KVGR------ 304
                 E   +  +V++ D + R DLR LP VTIDGE ARDFDDAV+CE + G+      
Sbjct: 242 PDAVLKEAAKLKPEVEEKDKEKRIDLRHLPFVTIDGEDARDFDDAVYCEARPGKLRLFSG 301

Query: 305 GWRLVVAIADVSHYVRPGMALDQEAYDRGNSVYFPRRVIPMLPEKLSNGICSLNPDVERL 364
           GW+L VAIADVS YV+ G ALD EA  RGNSVYFP RVIPMLPE+LSNG+CSLNP V+RL
Sbjct: 302 GWKLYVAIADVSSYVKIGSALDNEAQVRGNSVYFPERVIPMLPEQLSNGLCSLNPKVDRL 361

Query: 365 AMVCDMNISATGSIGKYRFYPAVFRSHARLTYNQVWGWLSGQSQPENEV----HQALQPH 420
           AMVC+M IS TG +  Y+FY AV  S ARLTYN+V   L      E +     +  + PH
Sbjct: 362 AMVCEMTISKTGEMTDYQFYEAVIHSQARLTYNKVSTILETPKTSEAKALRTEYAGVVPH 421

Query: 421 LQNLYKLFQVLLKARKKRGAIDFETVETQMLFNAQGKIENIVPVVRNDAHRLIEECMLAA 480
           L+ LY L++VLL AR  RGAIDFET ET+++F ++ KI  I P  RNDAH+LIEECMLAA
Sbjct: 422 LKQLYSLYKVLLGARHVRGAIDFETQETRIVFGSERKIAAITPTTRNDAHKLIEECMLAA 481

Query: 481 NVCASGFLHEHKQACLYRVHQGPTPEKLENLRAFLGEFGFSLAGGDE-PKAKDYAELLEK 539
           NV  + FL +H+   LYRVH GP PE+LE LRAFLGE G SL  G E P  KDY  LL  
Sbjct: 482 NVATAEFLKKHEIPALYRVHDGPPPERLEKLRAFLGELGLSLHKGKEGPTPKDYQALLAS 541

Query: 540 IQGRPDTQLLQTVMLRSLRQAQYAPENLGHFGLAYEAYTHFTSPIRRYPDLLVHRAIKAV 599
           I+ RPD  ++QTVMLRSL QA Y+ +N GHFGL YEAYTHFTSPIRRYPDLL HRAI++V
Sbjct: 542 IKDRPDYHVIQTVMLRSLSQAVYSADNQGHFGLNYEAYTHFTSPIRRYPDLLTHRAIRSV 601

Query: 600 LAGET--------------------YNPGKWEDIGLHCSGTERRADEATRDVDNWLKCFY 639
           +  +                     Y+    E +G  CS +ERRADEATRDV NWLKC +
Sbjct: 602 IHSKQNTPHVKRAGAMTIPKARIYPYDEAALEQLGEQCSMSERRADEATRDVVNWLKCEF 661

Query: 640 MKERIGEEFEGTIAGVAAFGIFVALDEVFVEGMVHVSELGEDYFHFEPAKHQMLGERSGK 699
           MK+R+GE F G I  V  FG+FV L +++VEG+VHV+ L  DY+HF+P  H++ GERSG+
Sbjct: 662 MKDRVGESFPGVITAVTGFGLFVELTDIYVEGLVHVTALPGDYYHFDPVHHRLAGERSGR 721

Query: 700 RFRLGDRLRVKLVRADLESGRIDFILAQEKKEGPAGDDEVVTWRKNTTGKPALGAAAPQG 759
            FRLGD + V+++R DL+  +IDF +  +  E P         RK    + A  A   +G
Sbjct: 722 SFRLGDTVEVQVMRVDLDERKIDFGMPDKPAESPNS-------RKKRGSETAAPATKGKG 774

Query: 760 KPRAGSGGGKPGKSAPGGKAGGPGQGGHRGKSPAAAKTGAPKRSGK------GGAKGGSK 813
            P A +   +P K+A    A       +R  S AAAK    ++S +        AK G K
Sbjct: 775 TP-AKTAEPEPAKAARRSSAKDKAPEAYR-PSDAAAKNAELRKSRELKQQLLNEAKSGGK 832

Query: 814 SASRGGANNGGRK 826
           +AS GG ++G  K
Sbjct: 833 AAS-GGKSHGAEK 844