Pairwise Alignments

Query, 556 a.a., Tfp pilus assembly protein PilF from Dechlorosoma suillum PS

Subject, 430 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  209 bits (532), Expect = 2e-58
 Identities = 144/429 (33%), Positives = 212/429 (49%), Gaps = 17/429 (3%)

Query: 129 LRNALLLAPDTPNLHNNLGLILLDQNKLAEAEQAFLQALRLAPQHADAMTNLSTVLQAQG 188
           L   L   P  PN+ + LG +L    K   A     +AL +  +H  A TNL  VL    
Sbjct: 2   LEGMLEQKPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVE 61

Query: 189 RTAEALEHCRRAAALAPRSAVTWTNLGNVLKSMGLHQEALEAQRQAIALAPDYALAHWNY 248
           + A+A+     A  L+  +A   +NL   L+       ALE    A+   P+     W+ 
Sbjct: 62  QYADAIAAQEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDR 121

Query: 249 AMSLLALGQLEAGWQEYEWGAAAGTRTRFAATLPRWQGEDLAGKHLLLRAEQGLGDTLQF 308
           A++LL +G+   G+++Y+   +  +     A    W G  L GK +LL  EQG GD L  
Sbjct: 122 ALTLLQVGRYAEGFRDYDSRLSLPSYQNRIADGTMWDGGPLDGKTILLTTEQGFGDVLLT 181

Query: 309 VRFAPELQRRGAKVTLECQPSLIPLLQGVAGIDHLV-AQTGELPADAWGCQCYLPLMSLP 367
            R+AP ++ RG +V LEC P L  LL G+ GID  V A T   P D      + PLMSLP
Sbjct: 182 ARYAPMVKARGGRVLLECHPELHRLLSGLEGIDGFVRAGTPYPPYDV-----HCPLMSLP 236

Query: 368 HLLHIGLADLPGPIPYLPLEAGRVRHWQDMLGPRSRFRVGLAWAGNPRHRNDHQRSCPLA 427
           H L   +  +P P         R +  + + GP    +VG+ W+G    +++ +R+  L+
Sbjct: 237 HRLGTTIDTVPPPTRLTVTAEAREKAARLVPGPDGTIKVGIIWSGRVTFKDNARRATTLS 296

Query: 428 QFVELLAVPGVEFISLQL--PAAEL-----PQGLRDVTAGIRDFADTAAIVSQLDLVISV 480
           +F+  L VP V   S+Q   P AEL        +  +     DFADTAA++ +LDLVI  
Sbjct: 297 RFLRFLNVPNVRLYSIQKGPPEAELETLGTSTLITPLGQHFNDFADTAAVLERLDLVIMT 356

Query: 481 DTAIIHLAGALGRPAWLLLPRDADWRWLQERQD----SPWYPSLKLYRQKMPGQWLPVLQ 536
           D+++ HLAG+LGRP W LL     W +   + +    +PWYPS++L+RQ  PG W  V  
Sbjct: 357 DSSVAHLAGSLGRPVWNLLQFMPYWVYGDGKGEWADTTPWYPSMRLFRQTTPGDWDSVFA 416

Query: 537 SVRRDLESL 545
           +  + L  L
Sbjct: 417 AAEQALRQL 425



 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 30/107 (28%), Positives = 50/107 (46%)

Query: 86  GKTEMALQLTLRQVELEPGNALAYDNLGQIFRQLGQYEGAELSLRNALLLAPDTPNLHNN 145
           GK E A+    R +E++  +  A+ NLG +   + QY  A  +  +A++L+    NL +N
Sbjct: 27  GKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYADAIAAQEHAVVLSGGNANLLSN 86

Query: 146 LGLILLDQNKLAEAEQAFLQALRLAPQHADAMTNLSTVLQAQGRTAE 192
           L + L    +   A +    ALR  P     + + +  L   GR AE
Sbjct: 87  LVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQVGRYAE 133



 Score = 37.0 bits (84), Expect = 2e-06
 Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 3/135 (2%)

Query: 35  PQAWQVHFNLGMCRDRLGRREAAFTAYEKAYQLAPDHVPCITNLAVNAFNLGKTEMALQL 94
           P  W     LG    + G+ EAA     +A ++   HV   TNL     ++ +   A+  
Sbjct: 13  PNVWSA---LGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYADAIAA 69

Query: 95  TLRQVELEPGNALAYDNLGQIFRQLGQYEGAELSLRNALLLAPDTPNLHNNLGLILLDQN 154
               V L  GNA    NL    R   ++  A   L  AL   P+ P L  +  L LL   
Sbjct: 70  QEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQVG 129

Query: 155 KLAEAEQAFLQALRL 169
           + AE  + +   L L
Sbjct: 130 RYAEGFRDYDSRLSL 144