Pairwise Alignments

Query, 283 a.a., flagellar motor protein from Dechlorosoma suillum PS

Subject, 297 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N1B4

 Score =  204 bits (518), Expect = 2e-57
 Identities = 116/286 (40%), Positives = 169/286 (59%), Gaps = 13/286 (4%)

Query: 6   KKHADEHENLERWLVSYADFITLLFAFFVVMYAISSVNEGKYRVLSDSLITAFKNPSIVD 65
           ++  +EH N ERWLVSYADFITLLFAFFVVMY+ISS+NEGKY+V+S++LI  F +     
Sbjct: 4   RRQPEEHVNHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISEALIGVFTDSD--- 60

Query: 66  GGAITVVP--KRTPDSVVKQIVVKEDPKVVEA--KQQQRDKMRNVAKDIFAVLAPLVQQG 121
             A+  +P     P +V     + +D + ++A   Q   D ++++A DI A    L+   
Sbjct: 61  -RALKPIPIGDERPKTVTPAKPLVKDSEQIDAGIAQAANDPLKSIADDISAAFGDLISSN 119

Query: 122 KVRVLETARGVTIEINDSILFAPGQAQLEQTSIRAMRAVGEVLAPTDFPITIEGHTDNIP 181
           ++ V      V IE+N S+LF  G A     +   +  V  +L P D PI +EG TD+ P
Sbjct: 120 QMTVRGNELWVEIELNSSLLFGSGDAMPSDIAFNIIDKVAAILRPFDNPIHVEGFTDDQP 179

Query: 182 IRTAQFPSNWELSAVRATTVLRLFVDAGVAPTHLTAIGYGETRPVEMNETVEGRARNRRV 241
           IRTAQ+P+NWELS+ R+ +++R+    GV P  L ++GYGE +PV  N T EGRARNRRV
Sbjct: 180 IRTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVANNATAEGRARNRRV 239

Query: 242 SILIDSMLPEKPAVVAPTPQAPMAPPAGVPPA----SPAGIATPAR 283
            +++   L  + ++   T  A   P A +  A    +PA + +P R
Sbjct: 240 VLVVSRNLDVRRSLTG-TGTAHAQPDAALKRAGTQTAPAPVKSPGR 284