Pairwise Alignments

Query, 283 a.a., flagellar motor protein from Dechlorosoma suillum PS

Subject, 367 a.a., flagellar motor protein MotB from Rahnella sp. WP5

 Score = 79.7 bits (195), Expect = 9e-20
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 53/326 (16%)

Query: 3   RRNKKHADEHENLERWLVSYADFITLLFAFFVVMYAISSVNEGKYRVLSDSLITAFKNPS 62
           ++  KH   H     W ++YADF+T + AFF+VM+ I S++  K  V    +   F+ P 
Sbjct: 13  KKKNKHGGGHHG-GSWKIAYADFMTAMMAFFLVMWLI-SISSPKELV---QIAEYFRTPL 67

Query: 63  IV--DGG-----AITVVPKRTPDSVVKQIVVKEDPKVVEAKQQQRDKMRNVAKDIFAVLA 115
            V   GG     A + +P    D  V+   V +  +   A +++ D ++ + + +  +LA
Sbjct: 68  AVAITGGPRSSDATSPIPGGGEDPTVQDGEVHKMEQSQGASKRESDDLQRLQQKLEDMLA 127

Query: 116 PLVQQGKVR----VLETARGVTIEINDS---ILFAPGQAQLEQTSIRAMRAVGEVLAPTD 168
              +   +R    +  T +G+ I+I DS    +F  G A +E      +RA+  VL    
Sbjct: 128 SDPRLKDLRPHLMINLTEQGLRIQIIDSKNRPMFQLGSAIVEPYMRDILRAIAPVLDGFP 187

Query: 169 FPITIEGHTDNIPIRTAQFP-SNWELSAVRATTVLRLFVDAGVAPTH-LTAIGYGETRPV 226
             I++ GHTD++P  T +   SNWELS  RA    R  +  G++    L  +G G +  +
Sbjct: 188 NKISLAGHTDDMPYATGERGYSNWELSTERANASRREMMSGGLSEGKVLRVMGMGSS--M 245

Query: 227 EMNETVEGRARNRRVSILIDSMLPE-----------------------------KPAVVA 257
           ++     G A NRR+SIL+ +   E                             K   +A
Sbjct: 246 QLKNHPAGDAINRRISILVLNKHAEEAIERENSEGEAITISDAGELQRQVQGTQKVPALA 305

Query: 258 PTPQAPMAPPAGVPPASPAGIATPAR 283
           P   +  A PA  P A+PA  ATP +
Sbjct: 306 PKMSSAPAAPALAPQANPAP-ATPEK 330