Pairwise Alignments

Query, 283 a.a., flagellar motor protein from Dechlorosoma suillum PS

Subject, 346 a.a., flagellar motor protein MotB from Erwinia tracheiphila HP pepo 2.2

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 91/310 (29%), Positives = 139/310 (44%), Gaps = 42/310 (13%)

Query: 4   RNKKHADEHENLERWLVSYADFITLLFAFFVVMYAISSVNEGKYRVLSDSLITAFKNP-- 61
           R KKH         W ++YADF+T L AFF+VM+ IS     +     +S+   FK P  
Sbjct: 12  RKKKHKGNEGGHGSWKIAYADFMTALMAFFMVMWLISISTPAQ----RESIAEYFKTPLK 67

Query: 62  SIVDGG-----AITVVPKRTPDSVVKQIVVKEDPKVV--EAKQQQRDKMR--------NV 106
             + GG     +++V+P    D   K   + E  KVV  +A+++  DK+R        + 
Sbjct: 68  VAITGGTRTSESVSVIPGGGQDPTQK---IGEVHKVVDMDAEKRNMDKIRLNRLREKLDQ 124

Query: 107 AKDIFAVLAPLVQQGKVRVLETARGVTIEINDS---ILFAPGQAQLEQTSIRAMRAVGEV 163
             +    L  L Q   + ++E   G+ I+I DS    +F  G A++E      +RA+  +
Sbjct: 125 LIEADPRLKALRQHLIINMVE--EGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPI 182

Query: 164 LAPTDFPITIEGHTDNIPIRTA-QFPSNWELSAVRATTVLRLFVDAGV-APTHLTAIGYG 221
           L      I++ GHTD+    T  +  SNWELS  RA    R  V  G+ A   L  +G  
Sbjct: 183 LNDIPNKISLAGHTDDFQYATGDRGYSNWELSTDRANASRRELVIGGLDAGKMLRVLGMA 242

Query: 222 ETRPVEMNETVEGRARNRRVSILI----DSMLPEKPAVVAPTPQAPMAPPAGV-----PP 272
           +T  +++N      A NRR+S+L+      M  EK    +   Q   + PA +     PP
Sbjct: 243 DT--MKLNNRGANDAVNRRISLLVLNHDTEMQIEKENSESDAVQIDNSDPANLKQIVAPP 300

Query: 273 ASPAGIATPA 282
              A    PA
Sbjct: 301 IPSAANNNPA 310