Pairwise Alignments

Query, 246 a.a., flagellar motor component from Dechlorosoma suillum PS

Subject, 266 a.a., MotA/TolQ/ExbB proton channel (NCBI) from Rhodospirillum rubrum S1H

 Score =  108 bits (271), Expect = 8e-29
 Identities = 70/251 (27%), Positives = 128/251 (50%), Gaps = 6/251 (2%)

Query: 1   MDSISIIGLLLGLGAIIGGQILEGGHLGSLLQPTAAMIVLGGTFGAVLLQSPVSTVVRAF 60
           M   +I+G+L G G      IL   +    L+  + ++V+GGT  A  +      VV A 
Sbjct: 1   MSLATILGVLFGFGLFCLSVILSTDNYLLFLKGESFIMVVGGTLAAAFVSFEPRYVVSAL 60

Query: 61  KMLKWVWVPPAVNHAWMINSISD---WSHVSRREGLLALEGFIAQLR--DPFIQKGLQLL 115
           + +  +     V+ + + + +     W ++ ++ GL  LE    ++R  D F+  GL L+
Sbjct: 61  RSMVAILFNHEVSRSILTHEVGRVIRWGYIIQKNGLPGLEADAQKVRKQDRFLSYGLDLV 120

Query: 116 VDGAEPERLREVLEVEIGTYEEELKAGAKFWESAGGFSPTIGIIGAVMGLIHVMENL-SD 174
           V G     +RE+L   +    +     A+   + GG +P  G+IG ++GLI + +++ S+
Sbjct: 121 VTGYTGTEVREILANTVENTFQRQVVPAEILRNMGGTAPAFGMIGTLVGLIIMFDSMGSN 180

Query: 175 PSKLGAGIAVAFVATIYGVGMANLVLIPMSTKLKAHIARLVTLREMLVDGLVGIANGDNP 234
           P  +GAG+AVA  AT+YG+  A L+ +P ++K+K     +     +L +GL  +A   +P
Sbjct: 181 PGSMGAGLAVALTATLYGLLSARLLFLPAASKVKQREELIRYRNYLLAEGLALLAERKSP 240

Query: 235 RIIESRLQGYV 245
           R I+ R+  Y+
Sbjct: 241 RYIQDRMNSYL 251