Pairwise Alignments

Query, 2039 a.a., chemotaxis protein histidine kinase-like protein from Dechlorosoma suillum PS

Subject, 937 a.a., hybrid sensor histidine kinase/response regulator from Rhodopseudomonas palustris CGA009

 Score =  276 bits (706), Expect = 1e-77
 Identities = 206/648 (31%), Positives = 305/648 (47%), Gaps = 31/648 (4%)

Query: 1258 EQLLPIFLEEAQELTQSITEQLRLWHDDPHDADVARALARLLHTLKGSARMAGAMNLGEL 1317
            + LL  FL E  E   ++  QL  +  +P++A +   + RL+HT+KG+    G   L  L
Sbjct: 2    DDLLREFLTETFESLDTVDNQLVRFEQEPNNAKILDNIFRLVHTIKGTCGFLGLPRLEAL 61

Query: 1318 THTLETRVEQAHKAGAAEAALIEEIQIAFDAIAQIVERLASGDTLDTPLPVELLALPETA 1377
             H  ET + +           +  I    D I  I+ +L +             A PE  
Sbjct: 62   AHAAETLMGKFRDGMPVTGEAVTLILTTIDRIKDILTQLEATQ-----------AEPEGE 110

Query: 1378 EADLAPAM-------PETQAAPASAEMPAAVAQPERPAAEAPATVQVAAAEPEVDAAAAS 1430
            + DL   +       PE  AA      P  VA+ E PA    A    A +      A   
Sbjct: 111  DGDLIGELERLSMRSPEEIAAELGGAAPVEVAEVEAPAEAVVAEAADANSTEGTLVAQTL 170

Query: 1431 RATLR---VRSDLMDRLVNEAGELSIARARIEGEMRSLKDSLLDLTENVIRLRRQLREVE 1487
               LR   V  D ++R   E  E+ +A   ++  +     ++ +      +  +  +   
Sbjct: 171  ERPLRPGEVSLDELERAFRET-EIEMASPPLQPAVSEAPAAVAEAAPPEPKPAKPAKPAA 229

Query: 1488 IQAETQIQARTAEAEVAHAGFDPLEFDRFTRFQELTRMMAESVNDVATVQQNL-LKNLDE 1546
              A  +       A    A               L  +M      V T  Q L +    E
Sbjct: 230  KPAAKKSGGEGEGAAEGGAAGGVANQSIRVNVDTLEHLMTMVSELVLTRNQLLEISRRHE 289

Query: 1547 ANAAIIAQARLNR---ELQQSLMSVRMVPFSSQTERLHRIVRQTAKEVGKRANLEIVGGQ 1603
             N   +   RL+    ELQ  +M  RM P  +  ++L RIVR  A E+GK+  LE+ G  
Sbjct: 290  DNEFKVPLQRLSTVTAELQDGVMKTRMQPIGNAWQKLPRIVRDLAAELGKQIELEMHGAD 349

Query: 1604 VELDRGVLDKMVAPLEHMLRNSVAHGLESREGRLAAGKEEIGEIELKVAQEGNEIIITMA 1663
             ELDR VLD +  PL HM+RNS  HGLE  E R  AGK E G I L    EG  I+I +A
Sbjct: 350  TELDRQVLDLIKDPLTHMVRNSADHGLEKPEDRARAGKPEQGTIRLSAYHEGGHIVICIA 409

Query: 1664 DDGAGLDLQRIRAKAESQGLL--AAGEEADDARLADLIFAPGFSTAGEVSQIAGRGVGMD 1721
            D+G GLD +RI+AKA + GL+  A  E+  +A++   IFAPGFSTA  V+ ++GRGVGMD
Sbjct: 410  DNGRGLDTERIKAKALANGLVTEAELEKMTEAQIHKFIFAPGFSTAAAVTSVSGRGVGMD 469

Query: 1722 VVRTEVTNLGGRLEMQSVAGKGLTFRIYLPLTLAVTQALIVRVGNRRYAIPSAMIAQVQE 1781
            VVRT +  +GG +E++SVAG+G    I +PLTLA+  ALIV  G  R+AIP   + ++  
Sbjct: 470  VVRTNIDQIGGTIEVKSVAGEGSAITIKIPLTLAIVSALIVEAGGDRFAIPQLAVVELVR 529

Query: 1782 VK---EQVLAGIRETGQVEWLGNRYPYHFLPHLLGEPQALPEARRLSWVLLLRSGTQRAA 1838
             +   E  +  I++T  +       P   L  LLG  +         ++++ + G+Q   
Sbjct: 530  ARANSEHRIERIKDTPVLRLRDKLLPLIHLKKLLGIDEGANSEPENGFIVVTQVGSQTFG 589

Query: 1839 IQVDELFGNQEIVVKNVGPQLARVIGIAGATVLGDGQVLLILNPVALA 1886
            I VD +F  +EIVVK +  +L  +   +G T+LGDG V++I++P  +A
Sbjct: 590  IVVDGVFHTEEIVVKPMSTKLRHIGMFSGNTILGDGAVIMIVDPNGIA 637



 Score = 76.3 bits (186), Expect = 2e-17
 Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 36/287 (12%)

Query: 1756 VTQALIVRVGNRR-YAIPSAMIAQVQEVKEQVLAGIRETGQVEWLGNRYPYHFLPHLLGE 1814
            +T  L+ R G+ +  A+P +++ +++E+            ++E    RY   +   L+  
Sbjct: 665  LTSLLVFRAGSSQPKAVPLSLVTRLEEIASD---------KIEMSNGRYMVQYRDQLM-- 713

Query: 1815 PQALPEARRLSW-----VLLLRSGTQRAAIQVDELFGNQEIVVKNVGPQLARVI-GIAGA 1868
            P  L E   ++      +L+     +   + VDE+    +IV +++  Q+     GI G+
Sbjct: 714  PLVLMEGVEVATSGVQPILVFADEDRSMGLVVDEIV---DIVEEHLHIQVGSSREGILGS 770

Query: 1869 TVLGDGQVLLILNPVALAARSEASVAVHTPAAPLESVPVEETPAQ-TLPTVMVVDDSLTV 1927
             V+  GQ   +++           VA   P A  + +  +E     T  +V++VDDS   
Sbjct: 771  AVI-KGQATEVID-----------VAHFLPMAFSDWLARKEMKQSLTTRSVLLVDDSAFF 818

Query: 1928 RKITSRLLSREGYHVLTAKDGVDGLEQLIDTMP-DVLLVDIEMPRMDGFDFTRNVRADER 1986
            R +   +L   GY V  A   V+GL  L      DV+L DIEMP M+GF+F   +R+D +
Sbjct: 819  RNMLGPVLKAAGYKVRVATSAVEGLSVLRSGAQFDVILTDIEMPEMNGFEFAEAIRSDTK 878

Query: 1987 LKHLPIIMITSRTADKHRNYAFEIGVNHYLGKPYQEDELLALVQEYT 2033
            + +LP+I ++S  +        + G+  Y+ K +    L+A ++E T
Sbjct: 879  MSNLPVIALSSLVSPAAIERGRQAGLTDYIAK-FDRPGLIAALKEQT 924



 Score = 45.1 bits (105), Expect = 5e-08
 Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 20/221 (9%)

Query: 692 ELLSIFLEEAQEVLGTIGSHIGLLREQPHNVDFLTTIRRSFHTLKGSGRMVGLKDLGETA 751
           +LL  FL E  E L T+ + +    ++P+N   L  I R  HT+KG+   +GL  L   A
Sbjct: 3   DLLREFLTETFESLDTVDNQLVRFEQEPNNAKILDNIFRLVHTIKGTCGFLGLPRLEALA 62

Query: 752 WAIEQVLNLWLRQEYDVSPELFALIEEAHVLFSAWVRYLE-TREGGAPDPAALVTKAD-- 808
            A E ++  + R    V+ E   LI          +  LE T+     +   L+ + +  
Sbjct: 63  HAAETLMGKF-RDGMPVTGEAVTLILTTIDRIKDILTQLEATQAEPEGEDGDLIGELERL 121

Query: 809 TMRGAETPPAPVAEAAPASALPELSLEESTPFADLGLEVDLDGASVDLTPPAME--VMP- 865
           +MR  E   A +  AAP     E++  E+   A +    D +     L    +E  + P 
Sbjct: 122 SMRSPEEIAAELGGAAPV----EVAEVEAPAEAVVAEAADANSTEGTLVAQTLERPLRPG 177

Query: 866 -VIASDMRDFMAEAEV--------PAVQETDAATALEAVPE 897
            V   ++     E E+        PAV E  AA A  A PE
Sbjct: 178 EVSLDELERAFRETEIEMASPPLQPAVSEAPAAVAEAAPPE 218



 Score = 36.6 bits (83), Expect = 2e-05
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 7/159 (4%)

Query: 1101 LYQIFMEEAQGHLEALQRQFGLLETDPE-MPTAEPFTRAAHTLGSIAGTIGLDAINRLGR 1159
            L + F+ E    L+ +  Q    E +P      +   R  HT+    G +GL  +  L  
Sbjct: 4    LLREFLTETFESLDTVDNQLVRFEQEPNNAKILDNIFRLVHTIKGTCGFLGLPRLEALAH 63

Query: 1160 ALEHALLRRDQSAHPASLEALEIIRLAISSLEEMVASVAAQQPPEPASHLADALDTLFPA 1219
            A E  L+ + +   P + EA+ +I   I  +++++  + A Q  EP     D +  L   
Sbjct: 64   AAE-TLMGKFRDGMPVTGEAVTLILTTIDRIKDILTQLEATQ-AEPEGEDGDLIGELERL 121

Query: 1220 ALNDNGDGNEVPAVVSAGAPA-AAPAAPPAPVQLKDDLD 1257
            ++       E+ A +   AP   A    PA   + +  D
Sbjct: 122  SMR---SPEEIAAELGGAAPVEVAEVEAPAEAVVAEAAD 157