Pairwise Alignments

Query, 157 a.a., GTP-binding protein from Methanococcus maripaludis S2

Subject, 490 a.a., putative GTP-binding factor (VIMSS) from Escherichia coli BW25113

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 10/125 (8%)

Query: 7   IVVMGSEDVGKTTLMENLIKNVGKV--EHNGTTVAIDYGRIEMDDKKFHFFGTPG----- 59
           + ++G  +VGK+TL   L +    +  +  G T    YGR E++ ++F    T G     
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTE 64

Query: 60  ---QERFGFMREIAVEGADYALLVLDATVGLRKVDNDIINLLSTKNIPFSVFINKMDLCN 116
              + R      +A+E AD  L ++DA  GL   D  I   L ++  P  +  NK D  +
Sbjct: 65  DGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLD 124

Query: 117 ESNAV 121
              AV
Sbjct: 125 PDQAV 129



 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 35/167 (20%), Positives = 76/167 (45%), Gaps = 16/167 (9%)

Query: 5   LKIVVMGSEDVGKTTLMENLIKNVGKVEHN--GTTVAIDYGRIEMDDKKFHFFGTPGQ-- 60
           +K+ ++G  +VGK+TL   ++     V ++  GTT    Y  +E D +++    T G   
Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRK 262

Query: 61  --------ERFGFMREI-AVEGADYALLVLDATVGLRKVDNDIINLLSTKNIPFSVFINK 111
                   E+F  ++ + A+E A+  +LV+DA  G+   D  ++  +        + +NK
Sbjct: 263 RGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNK 322

Query: 112 MDLCNESNAVEIINNLN---GLIESSNIVTGSIYRKEGLSEIMDQLK 155
            D  ++    ++   L+   G I+ + +   S     G+  + + ++
Sbjct: 323 WDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVR 369