Pairwise Alignments

Query, 284 a.a., AmmeMemoRadiSam system protein B from Methanococcus maripaludis S2

Subject, 282 a.a., protein of unknown function DUF52 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  154 bits (390), Expect = 2e-42
 Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 25/287 (8%)

Query: 3   RNPVVAGMFYPAEYHELLEMI-EYCYLNPRGPRELPSKRGKYTKPLGIVSPHAGYIYSGP 61
           RNPVVAGMFYP +   L   + E+    PR          +    L  + PHAGY+YSG 
Sbjct: 14  RNPVVAGMFYPDDPDLLRHTVREHLAAAPR----------EAAPTLLAMVPHAGYVYSGE 63

Query: 62  VAAHGYKKISENISGEITAIILGPNHTGLGSGIATMKGT-WKTPFGDMEIDNEFADRLWK 120
           VA  G    + N+    T ++LGPNHTGLG+ ++   G  W TP G + +D E AD L +
Sbjct: 64  VA--GQTLGAANLPD--TIVLLGPNHTGLGAPLSVWPGGHWHTPLGPVPVDEELADTLAE 119

Query: 121 ECDILDMDENSHLREHSIEVQLPFLK-HLEDLNIAKFKFVPISMMMQDYESCIDVGYVIA 179
                  D  +H+REHSIEV LPFL+ +  DL I     VP+++     ++  +    +A
Sbjct: 120 SDAGFTRDTAAHMREHSIEVVLPFLQEYTPDLTI-----VPVAVAEPHPQALREAAQALA 174

Query: 180 KVARELN---RKIVIIASTDFSHYEPQEQASKKDAVVIKDILELNDEEIFTDVVTHTISM 236
              R L    R++ ++ S+D SHY     A++ D + +  I  L+   ++  V    ISM
Sbjct: 175 GALRRLEAAGRRVAMVVSSDMSHYVTHADAARLDRLALARIEALDPLGLYAIVRDRGISM 234

Query: 237 CGYGPVIAMVKAMKDLGARTSYLLYYSTSGDVTKDYSEVVGYASLLI 283
           CG  P    + A  DLGA+T+ ++ Y+TSG+V+ D   VVGYA +L+
Sbjct: 235 CGVLPATLGLLAALDLGAQTARVVAYATSGEVSGDMQRVVGYAGVLV 281