Pairwise Alignments

Query, 242 a.a., ribonuclease HII from Methanococcus maripaludis S2

Subject, 217 a.a., ribonuclease HII from Pseudomonas fluorescens FW300-N2C3

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 26/181 (14%)

Query: 20  EKIIVGLDEAGRGPVLGPMVIASVKIDEKNLYKLNDLELKDSKQLSKKKREELYIIINEM 79
           E+++ G+DE GRGP+ G +V A+V +D         L L DSK+L++ +RE+LY   +E+
Sbjct: 19  EELVAGVDEVGRGPLCGAVVTAAVILDPNRPI----LGLNDSKKLTEARREKLY---DEI 71

Query: 80  CDVEKIVIDPETIDKQMEIINLNKIELSAFSKLSNHFIRENDNISIYIDACSSSEQSFSN 139
           C+            ++++ +N+    + A  +             ++I    + + +  +
Sbjct: 72  CEKALSWCIARAEVEEIDELNILHATMLAMQRAVQ---------GLHI----TPKLAMID 118

Query: 140 QFKAKLINKNVEIIAEHKADENYKIVSAASIIAKVTRDRVIEEYKETFGEIG----SGYP 195
             +   ++   E + +   D     ++AASI+AKV+RDR +  ++  +   G     GYP
Sbjct: 119 GNRCPKLSMRAEAVIQ--GDGKVPAIAAASILAKVSRDREMAAFELIYPGYGIGSHKGYP 176

Query: 196 S 196
           +
Sbjct: 177 T 177