Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 311 a.a., SPFH domain/Band 7 family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  154 bits (388), Expect = 3e-42
 Identities = 88/250 (35%), Positives = 149/250 (59%), Gaps = 14/250 (5%)

Query: 1   MSFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKV- 59
           M+ W  L+  IF++ L  +S+ +V      ++ RLGK    L+ G + +IPF+D    + 
Sbjct: 13  MAIW-GLIFAIFVIKLF-QSIRLVPTKSAYIVERLGKYHSTLDAGFHTLIPFVDKVAYIH 70

Query: 60  DVRTKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAI 119
           D++ + IDVPPQE  + D   V +D VIY  V D  +A   + +++YA I LAQT+ R++
Sbjct: 71  DLKEETIDVPPQECFSSDEVNVEVDGVIYISVTDPVKASYGITDYRYAAIQLAQTTTRSV 130

Query: 120 IGSLELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAE 179
           IG+L+LD    +R+ I+++++E LD+    WG++V + E++ I PP  +KNAM  Q+ AE
Sbjct: 131 IGTLDLDRTFEERDVISAKVVEVLDQAGAMWGIRVHRYEIKNITPPETVKNAMEMQVNAE 190

Query: 180 RLKRAAILEAEGEKQSKILKAQG-TAESMK----------IEAEGQAKAIQIVAESAQNY 228
           R +RA + ++EG+KQSKI +++G  AE++            EAEG+A+ I  ++ +    
Sbjct: 191 RERRALLAKSEGDKQSKINRSEGIKAETINRSEGEMQRRINEAEGKAEEILTLSRATAES 250

Query: 229 FKNEAQLYKA 238
            +  A +  A
Sbjct: 251 IERLASVIAA 260