Pairwise Alignments

Query, 337 a.a., site-2 protease family protein from Methanococcus maripaludis S2

Subject, 393 a.a., Probable conserved transmembrane alanine and leucine rich protein from Mycobacterium tuberculosis H37Rv

 Score =  117 bits (292), Expect = 6e-31
 Identities = 98/335 (29%), Positives = 156/335 (46%), Gaps = 41/335 (12%)

Query: 26  VVFYFWGIEGLILYMFLFTSVVLHELGHSYVAKKYGVKIEKILLLPIGGMAMMSEISK-- 83
           VV++  G  G ++   L  S++ HEL H+ VA++ GV +E + L   GG+  +   +K  
Sbjct: 46  VVYWLLGAGGAVM---LLASLLAHELAHAVVARRAGVSVESVTLWLFGGVTALGGEAKTP 102

Query: 84  EGEFKIAIAGPLVSLALGTV-------LLGISTVTDYTLAEYPLFQTVGGLNILLGIFNL 136
           +  F+IA AGP  SLAL          L G+ T        + L      +N+LLG+FNL
Sbjct: 103 KAAFRIAFAGPATSLALSATFGALAITLAGVRTPAIVISVAWWL----ATVNLLLGLFNL 158

Query: 137 LPAFPMDGGRVFRALLSKLTSMSYIKATKLASTVGQYFALALLIFGLINF-------NVI 189
           LP  P+DGGR+ RA L +    S ++A   A+  G+  AL L+  GL  F        V 
Sbjct: 159 LPGAPLDGGRLVRAYLWRRHGDS-VRAGIGAARAGRVVALVLIALGLAEFVAGGLVGGVW 217

Query: 190 LVLIAIFIYFGASQEYRALVADTLFQDVPAKDIMSKN----IVYVNSEDTVDDVLNLMLE 245
           L  I  FI+  A +E   +    LF  V   D M+        ++N ED +      +L 
Sbjct: 218 LAFIGWFIFAAAREEETRISTQQLFAGVRVADAMTAQPHTAPGWINVEDFIQ---RYVLG 274

Query: 246 NRFLGYPVLE-NGNIIGTIT---MNEISSTTAKTAKVKEIMSPPVMV------SPEAALN 295
            R   YPV + +G+I G +    + +++ +   T  V +I  P   V       P  AL 
Sbjct: 275 ERHSAYPVADRDGSITGLVALRQLRDVAPSRRSTTSVGDIALPLHSVPTARPQEPLTALL 334

Query: 296 ELIKGMANTDRVYVVDNGNILGIISKTDIVRTLSI 330
           E +  +    R  V +   ++GI++ +D+ R + +
Sbjct: 335 ERMAPLGPRSRALVTEGSAVVGIVTPSDVARLIDV 369