Pairwise Alignments

Query, 581 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

Subject, 595 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  249 bits (637), Expect = 2e-70
 Identities = 193/588 (32%), Positives = 259/588 (44%), Gaps = 55/588 (9%)

Query: 1   MGGMSGMDVEDERFLTRLAERLPGDAEVLARLAVMRVRLGGLDGAKACAERAVELAPGLA 60
           +   +G     +R L       P  A  L+ LA +    G LD A     RA+ L P LA
Sbjct: 47  LAAQTGRQAAAQRCLRLAVALRPDGAGGLSNLAGVEQSAGALDDAVQHYGRALRLMPDLA 106

Query: 61  EAHAALGLVQGRLRRFSEARLSLEHAVRINPRLGMAWLHLGEVLSTFPDQLQAAAEALRR 120
           +AHA+      RL +   A  +  HA+ + P    A  +    L +  D  +AA    RR
Sbjct: 107 DAHASRAGALRRLGQVPAALTAAGHALALAPDHADALANRAAALLSCGDA-RAAERCARR 165

Query: 121 AGGLMPRD----HRPLNALAGVLMGGKRYDDAVQAYRAAAAMATDPNLADMLNNMGVALE 176
           +  L  R        L  LA  L   +R+ +A  A R + A+  D N A+    +G  L 
Sbjct: 166 SLNLNARSAVTRSVALATLAAALAAQRRWAEAESAARESLAL--DRNAAEPWEVLGAVLA 223

Query: 177 RLERRDEAVPMMRAASLIRPDSPAIHDNLGNALLGTAQAEEAETCHRRALALGAKGGETW 236
           +L R  +++     A  +RPD P++H   G AL+  A+  EA                  
Sbjct: 224 KLARFPDSLDAFAMAERLRPD-PSVHAARGIALVAMARPAEAAV---------------- 266

Query: 237 SNLGNSLHRQGRLDEADAAYRRAIEINPEEPKFHTNLALNLLLAGRMEEGWREYEWRWRG 296
                             A+  A+   P++   H NL    L+AG    GW E++WR R 
Sbjct: 267 ------------------AFEHALADRPQDVGLHWNLGFARLMAGDYRRGWPEFDWRRRD 308

Query: 297 HPNLPPY--LVDRVWTGEPLPADLPGGGTLLLQAEQGYGDTLQFIRYVPQLKARGVNRVI 354
               PP+       W GEPL      G T+LL AEQG GDTLQF+RYVP + ARG  RV+
Sbjct: 309 AHADPPWRPFHQPSWQGEPL-----NGRTILLYAEQGLGDTLQFLRYVPLVAARG-GRVV 362

Query: 355 LACQPELIRLMETAPGLDAVVGEAGPMPPFDKAVTLLSLPGLLG-GL-AAPAAFPYLSVP 412
           L  Q  L+ L     G   V+    P+PPFD    L+SLP     GL   PA  PYL   
Sbjct: 363 LEVQRPLLPLTTGLEGAAQVIARGDPLPPFDLECPLMSLPHAFATGLDGVPADIPYLRPD 422

Query: 413 QG--VRMPLPAAPAGTLKVGLAWAGRPTHGDDWNRSIPARMLAPILDVPGVTFYSLQRGA 470
                R      P   L+VG+ WAG P    D  RS     L  + DVPG  FY LQ G 
Sbjct: 423 PARVARWRERLGPRDALRVGVVWAGNPRFPGDEERSPRLAGLRGLFDVPGCQFYGLQMGP 482

Query: 471 VAPRLGRPPA-DRLVEAADLCADFCDTAAMLMGLDLIISVDTAVVHLAGALGKPVWLLLP 529
               L      +   +     +DF DTAA++  LDL++S  T   HLAGALG P+W++LP
Sbjct: 483 GRAGLAESVMPESFTDLGSAISDFADTAAIMANLDLVVSSCTGPAHLAGALGVPLWVVLP 542

Query: 530 SVPDFRWRLEGEASDWYPAFRLFRRKGQSGWEAPIARLAEALRARVDR 577
              D+RW    + S WYP   LFR++    W A   R+A  L A   R
Sbjct: 543 FSADWRWLTGRDDSPWYPTACLFRQQAPGDWPAVAGRMAAELAALAQR 590



 Score = 65.5 bits (158), Expect = 6e-15
 Identities = 67/199 (33%), Positives = 86/199 (43%), Gaps = 9/199 (4%)

Query: 75  RFSEARLSLEHAVRINPRLGMAWLHLGEVLSTFPDQLQAAAEALRRAGGLMPRDHRPLNA 134
           R +EA       +  +P    A   LG VL+    +  AA   LR A  L P     L+ 
Sbjct: 19  RVAEAEDIYRRILGADPEYADAMQLLG-VLAAQTGRQAAAQRCLRLAVALRPDGAGGLSN 77

Query: 135 LAGVLMGGKRYDDAVQAYRAAAAMATDPNLADMLNNMGVALERLERRDEAVPMMRAASLI 194
           LAGV       DDAVQ Y    A+   P+LAD   +   AL RL +   A+     A  +
Sbjct: 78  LAGVEQSAGALDDAVQHY--GRALRLMPDLADAHASRAGALRRLGQVPAALTAAGHALAL 135

Query: 195 RPDSPAIHDNLGNALLGTAQAEEAETCHRRALALGAKGGETWS----NLGNSLHRQGRLD 250
            PD      N   ALL    A  AE C RR+L L A+   T S     L  +L  Q R  
Sbjct: 136 APDHADALANRAAALLSCGDARAAERCARRSLNLNARSAVTRSVALATLAAALAAQRRWA 195

Query: 251 EADAAYRR--AIEINPEEP 267
           EA++A R   A++ N  EP
Sbjct: 196 EAESAARESLALDRNAAEP 214



 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 2/138 (1%)

Query: 144 RYDDAVQAYRAAAAMATDPNLADMLNNMGVALERLERRDEAVPMMRAASLIRPDSPAIHD 203
           R  +A   YR    +  DP  AD +  +GV   +  R+  A   +R A  +RPD      
Sbjct: 19  RVAEAEDIYRRI--LGADPEYADAMQLLGVLAAQTGRQAAAQRCLRLAVALRPDGAGGLS 76

Query: 204 NLGNALLGTAQAEEAETCHRRALALGAKGGETWSNLGNSLHRQGRLDEADAAYRRAIEIN 263
           NL          ++A   + RAL L     +  ++   +L R G++  A  A   A+ + 
Sbjct: 77  NLAGVEQSAGALDDAVQHYGRALRLMPDLADAHASRAGALRRLGQVPAALTAAGHALALA 136

Query: 264 PEEPKFHTNLALNLLLAG 281
           P+      N A  LL  G
Sbjct: 137 PDHADALANRAAALLSCG 154



 Score = 35.4 bits (80), Expect = 7e-06
 Identities = 25/79 (31%), Positives = 35/79 (44%)

Query: 205 LGNALLGTAQAEEAETCHRRALALGAKGGETWSNLGNSLHRQGRLDEADAAYRRAIEINP 264
           LG     T +   A+ C R A+AL   G    SNL       G LD+A   Y RA+ + P
Sbjct: 44  LGVLAAQTGRQAAAQRCLRLAVALRPDGAGGLSNLAGVEQSAGALDDAVQHYGRALRLMP 103

Query: 265 EEPKFHTNLALNLLLAGRM 283
           +    H + A  L   G++
Sbjct: 104 DLADAHASRAGALRRLGQV 122



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 217 EAETCHRRALALGAKGGETWSNLGNSLHRQGRLDEADAAYRRAIEINPEEPKFHTNLALN 276
           EAE  +RR L    +  +    LG    + GR   A    R A+ + P+     +NLA  
Sbjct: 22  EAEDIYRRILGADPEYADAMQLLGVLAAQTGRQAAAQRCLRLAVALRPDGAGGLSNLAGV 81

Query: 277 LLLAGRMEEGWREYEWRWRGHPNL 300
              AG +++  + Y    R  P+L
Sbjct: 82  EQSAGALDDAVQHYGRALRLMPDL 105



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 244 HRQGRLDEADAAYRRAIEINPE 265
           H+ GR+ EA+  YRR +  +PE
Sbjct: 15  HQAGRVAEAEDIYRRILGADPE 36