Pairwise Alignments

Query, 1204 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

Subject, 581 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score =  170 bits (431), Expect = 3e-46
 Identities = 162/503 (32%), Positives = 215/503 (42%), Gaps = 87/503 (17%)

Query: 56  DALLAAAQACRLAG-------RPRDALLFCL-------DLLEMDRQH--MGCRLELAEAL 99
           D L AAA+A R AG       RP +AL   L       D ++  R    M     LA+ L
Sbjct: 109 DQLQAAAEALRRAGGLMPRDHRPLNALAGVLMGGKRYDDAVQAYRAAAAMATDPNLADML 168

Query: 100 RQIG-------QPDEAHAIIDILLMERPDSVQVWCGLGRLLNDENRLAGAELTLRRALGV 152
             +G       + DEA  ++    + RPDS  +   LG  L    +   AE   RRAL +
Sbjct: 169 NNMGVALERLERRDEAVPMMRAASLIRPDSPAIHDNLGNALLGTAQAEEAETCHRRALAL 228

Query: 153 DPGYGPAWAALGRILARRGEGEAAVDAFHAAITLEPEQPAHQVGLAEVLLEAHRTDEAAE 212
               G  W+ LG  L R+G  + A  A+  AI + PE+P                     
Sbjct: 229 GAKGGETWSNLGNSLHRQGRLDEADAAYRRAIEINPEEPKF------------------- 269

Query: 213 HINRALALDDECAAAHMARARLAMLEGRQKESWEEALWRHRLPGVVRPLLPAAPWEGEDL 272
           H N AL L               +L GR +E W E  WR R    + P L    W GE L
Sbjct: 270 HTNLALNL---------------LLAGRMEEGWREYEWRWRGHPNLPPYLVDRVWTGEPL 314

Query: 273 Q-----GAHLLLHAESELSVTLMMARFIPILAQRCTAITVLA-QPGLVPLLEAQPGITRV 326
                 G  LLL AE     TL   R++P L  R     +LA QP L+ L+E  PG+  V
Sbjct: 315 PADLPGGGTLLLQAEQGYGDTLQFIRYVPQLKARGVNRVILACQPELIRLMETAPGLDAV 374

Query: 327 LPLGKPLPDDLSADYAASLDDVALLLG--IEPQSLPTRPYLSAPRP-RIRRIRVPVGTLV 383
           +    P+P     D A +L  +  LLG    P + P   YLS P+  R+     P GTL 
Sbjct: 375 VGEAGPMPP---FDKAVTLLSLPGLLGGLAAPAAFP---YLSVPQGVRMPLPAAPAGTL- 427

Query: 384 KVGIAWGGE--------RSEDGLSFPHVLDLSTLPGTLLFSLETGPRAAE-ARQQADPGL 434
           KVG+AW G         RS        +LD+   PG   +SL+ G  A    R  AD   
Sbjct: 428 KVGLAWAGRPTHGDDWNRSIPARMLAPILDV---PGVTFYSLQRGAVAPRLGRPPADR-- 482

Query: 435 ITDLSPTIADYADLAGRIAEMDLVIAADGPAAHLAAAMGKPVLLLLPHAAHPRWMRDRDD 494
           + + +   AD+ D A  +  +DL+I+ D    HLA A+GKPV LLLP     RW  + + 
Sbjct: 483 LVEAADLCADFCDTAAMLMGLDLIISVDTAVVHLAGALGKPVWLLLPSVPDFRWRLEGEA 542

Query: 495 SPWYPGMALLRQPAPGQWGPPVA 517
           S WYP   L R+     W  P+A
Sbjct: 543 SDWYPAFRLFRRKGQSGWEAPIA 565



 Score =  159 bits (401), Expect = 8e-43
 Identities = 156/486 (32%), Positives = 212/486 (43%), Gaps = 52/486 (10%)

Query: 755  PSPAQMAAEAGRAMA---------LAAPGPALQAKGQINEAADLY--AQALAIDPFCAMA 803
            P   Q AAEA R            L A    L    + ++A   Y  A A+A DP  A  
Sbjct: 108  PDQLQAAAEALRRAGGLMPRDHRPLNALAGVLMGGKRYDDAVQAYRAAAAMATDPNLADM 167

Query: 804  NANLAV-LQHLAGKPDAAIAGFTRALGRLGHSAILANLAAALRRAGRLGEAEALLGEART 862
              N+ V L+ L  + +A       +L R    AI  NL  AL    +  EAE     A  
Sbjct: 168  LNNMGVALERLERRDEAVPMMRAASLIRPDSPAIHDNLGNALLGTAQAEEAETCHRRALA 227

Query: 863  AGRDTPDILSDLALVRRDQGRLSEAEALMRRARTQAPDRPGLSWGLAQILLGAGKLSEGL 922
             G    +  S+L      QGRL EA+A  RRA    P+ P     LA  LL AG++ EG 
Sbjct: 228  LGAKGGETWSNLGNSLHRQGRLDEADAAYRRAIEINPEEPKFHTNLALNLLLAGRMEEGW 287

Query: 923  PLLAH----HPDPPGRALHLPRWDGGDVVAT-----SVLVEITGHADDALLLARFLPMLA 973
                     HP+ P   +    W G  + A      ++L++      D L   R++P L 
Sbjct: 288  REYEWRWRGHPNLPPYLVDRV-WTGEPLPADLPGGGTLLLQAEQGYGDTLQFIRYVPQLK 346

Query: 974  ARGA-LVHVACPDDMVALLADLPGIEQVVGEDDPLPECQVRTSLAALPGLLG--LADTAR 1030
            ARG   V +AC  +++ L+   PG++ VVGE  P+P      +L +LPGLLG   A  A 
Sbjct: 347  ARGVNRVILACQPELIRLMETAPGLDAVVGEAGPMPPFDKAVTLLSLPGLLGGLAAPAAF 406

Query: 1031 PTGSGGYLLAGRGRR----PVRDNRLRVGLTWGPGRGTAGRPCTLGD---------MLGL 1077
            P     YL   +G R          L+VGL W      AGRP T GD         ML  
Sbjct: 407  P-----YLSVPQGVRMPLPAAPAGTLKVGLAW------AGRP-THGDDWNRSIPARMLAP 454

Query: 1078 AID-PAVSLLALVEDEHLGHIQAEGVEALIERPMPQPAHLAEMAALISGLDVVVGGDTVQ 1136
             +D P V+  +L        +     + L+E      A   + AA++ GLD+++  DT  
Sbjct: 455  ILDVPGVTFYSLQRGAVAPRLGRPPADRLVEAA-DLCADFCDTAAMLMGLDLIISVDTAV 513

Query: 1137 LHLAAALGKPVLALLPHGFDWRWPQGREDSPWYPTVRVLRAGPSGHWREPLRRVVSALAA 1196
            +HLA ALGKPV  LLP   D+RW    E S WYP  R+ R      W  P+ R+  AL A
Sbjct: 514  VHLAGALGKPVWLLLPSVPDFRWRLEGEASDWYPAFRLFRRKGQSGWEAPIARLAEALRA 573

Query: 1197 MAEKKA 1202
              ++ A
Sbjct: 574  RVDRPA 579



 Score = 51.6 bits (122), Expect = 2e-10
 Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 7/189 (3%)

Query: 101 QIGQPDEAHAIIDILLMERPDSVQVWCGLGRLLNDENRLAGAELTLRRALGVDPGYGPAW 160
           ++G  D A A  +  +   P   +    LG +     R + A L+L  A+ ++P  G AW
Sbjct: 38  RLGGLDGAKACAERAVELAPGLAEAHAALGLVQGRLRRFSEARLSLEHAVRINPRLGMAW 97

Query: 161 AALGRILAR-RGEGEAAVDAFHAAITLEPEQPAHQVGLAEVLLEAHRTDEAAEHINRALA 219
             LG +L+    + +AA +A   A  L P        LA VL+   R D+A +    A A
Sbjct: 98  LHLGEVLSTFPDQLQAAAEALRRAGGLMPRDHRPLNALAGVLMGGKRYDDAVQAYRAAAA 157

Query: 220 LDDECAAAHMARARLAMLEGRQKESWEEALWRHRLPGVVRPLLPAAPWEGEDLQGAHLLL 279
           +  +   A M       LE  + E  +EA+   R   ++RP  PA      D  G  LL 
Sbjct: 158 MATDPNLADMLNNMGVALE--RLERRDEAVPMMRAASLIRPDSPAI----HDNLGNALLG 211

Query: 280 HAESELSVT 288
            A++E + T
Sbjct: 212 TAQAEEAET 220