Pairwise Alignments
Query, 1204 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1
Subject, 600 a.a., hypothetical protein from Azospirillum sp. SherDot2
Score = 184 bits (468), Expect = 1e-50
Identities = 170/562 (30%), Positives = 238/562 (42%), Gaps = 63/562 (11%)
Query: 23 TLWQEAALARR-YGDTEPALDAYRRIIELDPSNTDA------LLAAAQACRLAGRPRDAL 75
++W A ARR G A AY + L P+ A LL ++ + A R
Sbjct: 47 SIWHNLAEARRALGQPAGAAQAYHHALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRA 106
Query: 76 L---------------FCLDLLEMDRQHMGCR-------------LELAEALRQIGQPDE 107
L LD M+R + R L LA L + +P
Sbjct: 107 LALDPGFAEAWSVAGSILLDRRAMERLPIVLRRAVRLAQDNPLPWLALAGGLGETAEPAL 166
Query: 108 AHAIIDILLMERPDSVQVWCGLGRLLNDENRLAGAELTLRRALGVDPGYGPAWAALGRIL 167
A + + PD + LL RL A+ R + P G A A +
Sbjct: 167 PLACVRRAVALSPDRPAGYVNHAGLLIRLGRLDAAQALHGRLRRLAPLEGHAEAGDSLVA 226
Query: 168 ARRGEGEAAVDAFHAAITLEPEQPAHQVGLAEVLLEAHRTDEAAEHINRALALDDECAAA 227
RG+ A+ +++L+P PA + L+ + T+ A RALAL E A
Sbjct: 227 TLRGDFATALSLARRSLSLQPASPAALINLSLAEHGSGMTEPARLGNERALALQPESDVA 286
Query: 228 HMARARLAMLEGRQKESWEEALWRHRLPGVVRPLLPAAPWEGEDLQGAHLLLHAESELSV 287
+ + + EG + W R R+ V P A W G + G LLL AE
Sbjct: 287 RFNLSMVLLAEGDFAKGWRLYESRWRMERVAYPA-HAPRWTGGNPAGRSLLLVAEQGQGD 345
Query: 288 TLMMARFIPILAQRCTAITVLAQPGLVPLLEAQPGITRVLPLGKPLPDDLSADYAASLDD 347
TL R+ P+LA + ++ QP LV LL PGI V L +P P + D L
Sbjct: 346 TLQFVRYAPMLAALGAHVHLMVQPALVRLLSGLPGIASVRSLTEPPP---ACDACIPLLS 402
Query: 348 VALLLGIEPQSLPTR-PYLSAPRPRI----RRIRVPVGTL--VKVGIAWGGERSEDGLSF 400
+ L+ G ++P PYLS P RR+ G +KVG+ W G + D
Sbjct: 403 LPLVFGTGLATIPASVPYLSPPGQERAAWKRRLDGSPGGEGGLKVGLVWAGS-AHDEQFV 461
Query: 401 PHVLD------------LSTLPGTLLFSLETGPRAAEARQQADPGL-ITDLSPTIADYAD 447
H++D L+ +PG +SL+ GP A+EAR GL + D + D+AD
Sbjct: 462 AHMVDRRRSLPLAALAPLAGIPGVRFYSLQKGPPASEARTS---GLDLVDWMDEVEDFAD 518
Query: 448 LAGRIAEMDLVIAADGPAAHLAAAMGKPVLLLLPHAAHPRWMRDRDDSPWYPGMALLRQP 507
A +AE+DLVI+ D HLA A+G+PV +L H A RW+R+R DSPWYP M L RQ
Sbjct: 519 TAALVAELDLVISVDTSVCHLAGALGRPVWMLSRHDACWRWLRNRSDSPWYPTMRLFRQD 578
Query: 508 APGQWGPPVAEARRRMEMLAQL 529
PG W P + R +E A L
Sbjct: 579 RPGDWPPVILRVRTALERWAML 600
Score = 158 bits (400), Expect = 1e-42
Identities = 153/499 (30%), Positives = 211/499 (42%), Gaps = 43/499 (8%)
Query: 736 LALSPGMAPAVHYGPDSLPPSPA--QMAAEAGRAMALAA--PGPALQAKGQINEAAD--- 788
LAL PG A A L A ++ RA+ LA P P L G + E A+
Sbjct: 107 LALDPGFAEAWSVAGSILLDRRAMERLPIVLRRAVRLAQDNPLPWLALAGGLGETAEPAL 166
Query: 789 ---LYAQALAIDPFCAMANANLAVLQHLAGKPDAAIA--GFTRALGRL-GHSAILANLAA 842
+A+A+ P N A L G+ DAA A G R L L GH+ +L A
Sbjct: 167 PLACVRRAVALSPDRPAGYVNHAGLLIRLGRLDAAQALHGRLRRLAPLEGHAEAGDSLVA 226
Query: 843 ALRRAGRLGEAEALLGEARTAGRDTPDILSDLALVRRDQGRLSEAEALMRRARTQAPDRP 902
LR G A +L + + +P L +L+L G A RA P+
Sbjct: 227 TLR--GDFATALSLARRSLSLQPASPAALINLSLAEHGSGMTEPARLGNERALALQPESD 284
Query: 903 GLSWGLAQILLGAGKLSEGLPLLAHH--PDPPGRALHLPRWDGGDVVATSVLVEITGHAD 960
+ L+ +LL G ++G L + H PRW GG+ S+L+
Sbjct: 285 VARFNLSMVLLAEGDFAKGWRLYESRWRMERVAYPAHAPRWTGGNPAGRSLLLVAEQGQG 344
Query: 961 DALLLARFLPMLAARGALVHVACPDDMVALLADLPGIEQVVGEDDPLPECQVRTSLAALP 1020
D L R+ PMLAA GA VH+ +V LL+ LPGI V +P P C L +LP
Sbjct: 345 DTLQFVRYAPMLAALGAHVHLMVQPALVRLLSGLPGIASVRSLTEPPPACDACIPLLSLP 404
Query: 1021 GLLGLADTARPTGSGGYLLAGRGRR---------PVRDNRLRVGLTWGPGRGTAG----- 1066
+ G P G+ R P + L+VGL W G+A
Sbjct: 405 LVFGTGLATIPASVPYLSPPGQERAAWKRRLDGSPGGEGGLKVGLVWA---GSAHDEQFV 461
Query: 1067 -------RPCTLGDMLGLAIDPAVSLLALVEDEHLGHIQAEGVEALIERPMPQPAHLAEM 1119
R L + LA P V +L + + G++ L++ M + A+
Sbjct: 462 AHMVDRRRSLPLAALAPLAGIPGVRFYSLQKGPPASEARTSGLD-LVDW-MDEVEDFADT 519
Query: 1120 AALISGLDVVVGGDTVQLHLAAALGKPVLALLPHGFDWRWPQGREDSPWYPTVRVLRAGP 1179
AAL++ LD+V+ DT HLA ALG+PV L H WRW + R DSPWYPT+R+ R
Sbjct: 520 AALVAELDLVISVDTSVCHLAGALGRPVWMLSRHDACWRWLRNRSDSPWYPTMRLFRQDR 579
Query: 1180 SGHWREPLRRVVSALAAMA 1198
G W + RV +AL A
Sbjct: 580 PGDWPPVILRVRTALERWA 598
Score = 46.2 bits (108), Expect = 8e-09
Identities = 46/153 (30%), Positives = 60/153 (39%), Gaps = 17/153 (11%)
Query: 120 PDSVQVWCGLGRLLNDENRLAGAELTLRRALGVDPGYGPAWAALGRILARRGEGEAAVDA 179
P + + G L E LA + T L P W L G+ A A
Sbjct: 11 PAAALTFRGAAALAEGEAVLAASLFTTAALLA--PHRASIWHNLAEARRALGQPAGAAQA 68
Query: 180 FHAAITLEPEQPAHQVGLAEVLLEAHRTDEAAEHINRALALDDECAAAHMARARLAMLEG 239
+H A+ L P P GLA +LL++ R AA RALALD A A + +L+
Sbjct: 69 YHHALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSI-LLDR 127
Query: 240 RQKESWEEALWRHRLPGVVRPLLPAA-----PW 267
R E RLP V+R + A PW
Sbjct: 128 RAME---------RLPIVLRRAVRLAQDNPLPW 151
Score = 42.4 bits (98), Expect = 1e-07
Identities = 57/211 (27%), Positives = 83/211 (39%), Gaps = 20/211 (9%)
Query: 767 AMALAAPGPALQAKGQINEAADLYAQALAIDPFCAMANANLAVLQHLAGKPDAAIAGFTR 826
A AL G A A+G+ AA L+ A + P A NLA + G+P A +
Sbjct: 12 AAALTFRGAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAGAAQAYHH 71
Query: 827 ALG-RLGHSAILANLAAALRRAGRLGEAEALLGEARTAGRDTPDILSDLALVRRDQGRLS 885
AL R + A LA+ L ++ R A A + S + D+ +
Sbjct: 72 ALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSILLDRRAME 131
Query: 886 EAEALMRRARTQAPDRPGLSWGLAQILLGAGKLSE-GLPL------LAHHPDPP------ 932
++RRA A D P L W + G G+ +E LPL +A PD P
Sbjct: 132 RLPIVLRRAVRLAQDNP-LPW--LALAGGLGETAEPALPLACVRRAVALSPDRPAGYVNH 188
Query: 933 -GRALHLPRWDGGDVVATSV--LVEITGHAD 960
G + L R D + + L + GHA+
Sbjct: 189 AGLLIRLGRLDAAQALHGRLRRLAPLEGHAE 219