Pairwise Alignments

Query, 295 a.a., Flagellar motor rotation protein MotA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 288 a.a., chemotaxis motA protein from Caulobacter crescentus NA1000 Δfur

 Score =  212 bits (539), Expect = 9e-60
 Identities = 110/284 (38%), Positives = 171/284 (60%), Gaps = 2/284 (0%)

Query: 4   LLGYLVVIGTVFGGYVMTGGHLGALYQ--PAELVIIGGAGIGAFIVGNNGKAIKGTMKAI 61
           ++G +++   VFG Y+M GG +  +    P EL+ IGGAG+ AF++GN+   IK T+   
Sbjct: 4   IIGIVLLFAMVFGSYIMAGGKMDVIIHAAPHELMAIGGAGVAAFLIGNSVTVIKATLGGF 63

Query: 62  PLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAV 121
             +F+  K+    Y DLL+LL+ L    + +G+ +LE  IE P ES IF+ YP+I  D  
Sbjct: 64  GTIFKGPKWKAQDYRDLLSLLFLLTKTMKSKGVIALEAHIEKPHESTIFSRYPKIAHDHF 123

Query: 122 MLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAV 181
            +DFI D LR++     +  ++E  M++++E H  EA   A++L  + D LPA GIVAAV
Sbjct: 124 AVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEAHGAAHALTQLSDGLPALGIVAAV 183

Query: 182 MGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCV 241
           +GV+  + S   P A LG +I  A+VGTF+G+ +AYG + P+AT L     E     + +
Sbjct: 184 LGVIKTMGSITEPPAVLGTMIGGALVGTFMGVFMAYGLVGPMATRLGGVLDEDHNFYKII 243

Query: 242 KITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRN 285
           +  L+++L+G A  I+VE GR  + S+ +PSF ELEE +  + N
Sbjct: 244 QAVLVAHLHGNAAQISVEIGRGNVPSAYQPSFAELEEALSQMPN 287